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Domain assignment for WP_011526885.1.40060 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011526885.1.40060
Domain Number 1 Region: 316-449
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 4.04e-30
Family HD domain 0.017
Further Details:      
 
Domain Number 2 Region: 208-291
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000000000835
Family Eukaryotic type KH-domain (KH-domain type I) 0.0033
Further Details:      
 
Weak hits

Sequence:  WP_011526885.1.40060
Domain Number - Region: 28-71
Classification Level Classification E-value
Superfamily F1F0 ATP synthase subunit B, membrane domain 0.000327
Family F1F0 ATP synthase subunit B, membrane domain 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_011526885.1.40060
Sequence length 520
Comment ribonuclease Y [Lawsonia intracellularis]; AA=GCF_000055945.1; RF=representative genome; TAX=363253; STAX=29546; NAME=Lawsonia intracellularis PHE/MN1-00; strain=PHE/MN1-00; AL=Complete Genome; RT=Major
Sequence
MSFILVLCTVSSLFVGGGTGIFLYKKVSKKYIGDAKELAIRIVEEARKEGQAQKKEILLQ
GQNEIFNQKKEFEFDFKQREKELSIKDKKLQVQSERLEERLERAAEKEHEILKVEKELSI
KERNLLTLEEQLKSRIDEQEKQLQKISGLTVEEAKQSLFEEVKNRSRHESAKMMRLIEAE
AVETANRKAKEIIANAIQRYAGDYVSEHTVTAVTLPSEDMKGRIIGREGRNIRALESATG
VDFIIDDTPETVVLSAYSPMRRQVAKMALERLIQDGRIHPARIEEIVRKCEEDLAIQVRE
IGEQATFDIGVYGIHPELIRILGQLNYRTSYTQNVLRHSIEVASLCGMMAAELGVDIKKA
KRAGLLHDIGKAVDHEVEGSHAIIGAELAKKFNETEEIVHAIEAHHEEKGKPETALAILV
QASDCLSGARPGARLELLESYVKRLEHLENIAGEFEGVSKAYAIQAGREVRVMVDADSIG
DDQTYLLCKDIAGRIEESLTYPGQIRVTVIREHRAVGYAK
Download sequence
Identical sequences A0A1S8BT11 Q1MQ71
gi|94987244|ref|YP_595177.1| 363253.LI0802 WP_011526885.1.40060 WP_011526885.1.91582 WP_011526885.1.98040 gi|442556086|ref|YP_007365911.1|

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