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Domain assignment for WP_011837785.1.31213 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011837785.1.31213
Domain Number 1 Region: 109-232
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 4.25e-27
Family Family 6 carbohydrate binding module, CBM6 0.011
Further Details:      
 
Domain Number 2 Region: 350-641,734-785
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.44e-17
Family Integrin alpha N-terminal domain 0.0069
Further Details:      
 
Domain Number 3 Region: 29-99
Classification Level Classification E-value
Superfamily Type I dockerin domain 3.04e-17
Family Type I dockerin domain 0.00073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_011837785.1.31213
Sequence length 820
Comment carbohydrate-binding protein [Ruminiclostridium thermocellum]; AA=GCF_000015865.1; RF=representative genome; TAX=203119; STAX=1515; NAME=Ruminiclostridium thermocellum ATCC 27405; strain=ATCC 27405; AL=Complete Genome; RT=Major
Sequence
MKKTLVFLTALSLIFTLFISYSLSAGPASTKYGDLNADGKINSTDYNLGKRLILRTISEL
PISNGSVAFDLNGDSKVDSTDLTALKRYLLGVIDKFPVGTDIPSQTQKTRYQAEDAMLYK
AFEETIHAGYDGRSYVNYDNEPGGYIEWNVNVSSSGTYKLIFRYANGSNNNRPMEIRVNS
NLVAGSLDFYPTSAWTVWNDQSIVVTLNAGNNVIRATGIASDGGPNVDYLEVIPTNEPPA
PTPSPTPTVGPTPAGARQMERLDRGLVAVKVNNGVFLSWRMFGTDPSNIAFNLYRNGTKI
NSTPITGATNYVDTGGTTSSTYTVRAVINGQEQEASKPVSVWAQNYLQIPIQPPSSAYEA
NDCSAADLDGDGEYEIVLKWEPNNAKDNSQSGYTDNVYLDAYKLNGTRLWRIDLGRNIRA
GAHYTQFMVYDLDGDGKAEVACKTADGTRDGKGNVIGNPNADYRNSSGYILSGPEYLTVF
DGQTGAAITTVDYDPPRGNVSSWGDNYGNRVDRFLACIAYLDGQRPSLVMCRGYYTRSVL
VAWDFRNGRLTKRWVFDGNNYSGYNGQGNHNLSVADVDGDGRDEIIYGACTIDDNGKGLY
TSGLGHGDALHVGDLNPNRPGLEIWSCFESSGGAALRDARTGEVLFRWHRSSDTGRACAA
DITASSPGAELWAAGSPLFSCTGQNIGTAPSQINFAIWWDGDELRELLDGITISKYGVGT
LFTATGCASNNGTKSTPCLQADLLGDWREEVIFRTSDNRYLRIYTTTATTNRRIYTLMHD
PVYRLGIAWQNVAYNQPPHTSFFIGAGMAEPPKPNIYLVP
Download sequence
Identical sequences A3DC06
Cth-1006 gi|125972768|ref|YP_001036678.1| WP_011837785.1.31213 203119.Cthe_0246

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