SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_011838033.1.31213 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011838033.1.31213
Domain Number 1 Region: 687-862
Classification Level Classification E-value
Superfamily Fibronectin type III 3.37e-23
Family Fibronectin type III 0.00024
Further Details:      
 
Domain Number 2 Region: 509-681
Classification Level Classification E-value
Superfamily Fibronectin type III 5.03e-23
Family Fibronectin type III 0.00079
Further Details:      
 
Domain Number 3 Region: 1710-1795
Classification Level Classification E-value
Superfamily PKD domain 5.1e-17
Family PKD domain 0.0017
Further Details:      
 
Domain Number 4 Region: 3556-3641
Classification Level Classification E-value
Superfamily PKD domain 1.07e-16
Family PKD domain 0.0021
Further Details:      
 
Domain Number 5 Region: 1502-1592
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000879
Family Fibronectin type III 0.0026
Further Details:      
 
Domain Number 6 Region: 1264-1343
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000497
Family Fibronectin type III 0.0067
Further Details:      
 
Domain Number 7 Region: 6189-6272
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000876
Family Fibronectin type III 0.0019
Further Details:      
 
Domain Number 8 Region: 861-951
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000124
Family Fibronectin type III 0.0037
Further Details:      
 
Domain Number 9 Region: 4549-4630
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.00000235
Family Rhamnogalacturonase B, RhgB, middle domain 0.032
Further Details:      
 
Weak hits

Sequence:  WP_011838033.1.31213
Domain Number - Region: 2694-2776
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.00745
Family Rhamnogalacturonase B, RhgB, middle domain 0.032
Further Details:      
 
Domain Number - Region: 1054-1151
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0312
Family Fibronectin type III 0.0068
Further Details:      
 
Domain Number - Region: 1987-2032
Classification Level Classification E-value
Superfamily Hyaluronate lyase-like, C-terminal domain 0.0769
Family Hyaluronate lyase-like, C-terminal domain 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_011838033.1.31213
Sequence length 6885
Comment cellulose 1,4-beta-cellobiosidase [Ruminiclostridium thermocellum]; AA=GCF_000015865.1; RF=representative genome; TAX=203119; STAX=1515; NAME=Ruminiclostridium thermocellum ATCC 27405; strain=ATCC 27405; AL=Complete Genome; RT=Major
Sequence
MEGNFVTQSYYSHSSRLTDGVLEVKGDFIQKKYLSGSGARDNFYATGKHKTILSGEKLQK
VSFETAESRFNILELRNYSEDGVEFNQPLNANTFIDNGCVIKFPGEQKRGWKLSADEEYT
GNLYIGAGVLDLNGFNLTVNGDLIQSGGVIDLNGGCLTVKGDYRIQTEIPSSNGQTINMY
SNGYLKMTKPTDYLKVEGDFLIYSQHSHANYLTDGTLEVKGNFTQKRYNSYDNFKATGNH
RVVLSGEELQIVTFESSSGSGSCINILEITNSSDKGVRFTSKVFVNGALKYTSTPVAGGE
YLCIGTNTAINWDTWDYDLCIDGNRTLVRDINIKGSLFLNDGILNLNGYKLSVGGNLIQS
GGTMYINKGQLLVEGSYRIQSRNYQADGTFEYGRCYGYLRMNNEEDYVRVGRDFVTQSYY
SHASYLTAGILEVKGDFTQKGDSSSSSNFRATGTHKTILSGESLQRVTFTHPGDSGFNEL
IITKPLESGYIFSHSPLWNIIKEEVIDSEPPSVPTNLQVVSKTLTTVTLQWDTSEDNVNV
EGYEIYRNGIRVGNSRTLSYIDHGLVPNTEYTYTVRAYDAVRNLSDFSEAVKVRTDVDNE
PPTAPKNLGISSRTDTSVTLTWSASTDNAAVTGYKIYRNGVNIADTVNTRYTDYDLEPGT
YSYYVKAFDASGNVSDVSNTVVFDNQPPTAPENVFVTSVTTTSVSLEWTESTDNIGVAGY
RIYRNGVHIRNVTGNKFTDTGLTPDETYIYIIRAYDNAGNVSPESESITVVAASDAEPPS
APSNLRVVSKSESSITLTWDKSTDNVKVAGYKIYRDGIEVGTSDTNLFIDKKVTKDHSYT
YSVKAYDMAGNYSAESQPLTVTLVLPAAPVQIEAVAGEGKIDVVWSKVDDSDIVKYRLYR
SENGHDYELIYESALMSYTDSNVLYGNTYIYMVKAVDIYGNESSGSTSQAVEPLPDITPP
VIVGMVPADGSRVNGETRLSVLASDNVKIKAMEFLFTSNKEEGTWESIGATTTGSVNWNT
KELVDGLYYVKVVVSDTSDNISEFISEYTVDNTPPAAPVLKASSSELRVLLEWELSVKAE
DFDHFRVYRSTEGGAEDTFELIENTMDFSYADTAAPLDVDSFYKVTAVDMLGNESEASNI
VSARPGSDTTPPQIIKFTPEDGSSIRSGVTLTAYAKDNLEVNMYSFQFRPLDENGNPIGD
GEWTPIADVQNPGKNEVQVKWDTLATGPEGEELYPDGYYQVRVMVSDAAGNFSQKIHTYL
LANDPPSPPEHLYVQAGEWQLVVSWSPVLRPDFRYYVLYRKEGREGTWEKIVSNTTSNVY
IDTMRDPQKEYFYAVSVVNDLGRESERTYDYSKDENISEGIDIRALHQTSSPLIFSMKPA
ELSRTNSTLEIETVISDAVGVSVIYEYAYLGDSPSSGVDGDETWHLIGEDSSPVPGKVYD
LEDFLERILKGEELPEIGVGENYFVSNCIWNVSSLASGTYAVRATAVNKGNKEASLIKKY
IVDREAPQTPSGLKVVDPKVGGELQLSWERSKSDDVDHYVVYRATESGGNFKAVTRTKSL
VYTDKGLEDGKIYYYVVTAVDSAGNESGKSNQVSSVPSALSDLTIVSVEANPQVPAYDRQ
AEIICTVKNLGYAKAEGRVDFYIENQGEWSKIGSSTIEVKSMDNSKASITWIPDSHLDNI
VTVMAVVNTMDGSEDINEDNNSLTAELRLNIPPEAHIQTKEWIYSGDVFTLDGSLSKDSD
GRIVSYKWDLENGVEKKGAHITHTYQIPGIYNITLTVTDNNGANSTATVSIHVYDNRPDL
IVSDIQWDPEEPQEGDIVNIVAKIANVGKGPNRQGFLTGFYIDNKYMGYVRVDESINPGE
SIDVPFTWKAEPGVHVLKVAANDILDNLKEISVENNTKTVALTTQQVNFPDVVADEITWT
CGDNVKIDSESPFGYKVKISNIGTKKAEKFFVSLYVDGEWTAKQHINVLEAGETRELTFI
VKPKSGKHEVTVKVDDPVPVLVELNNDNNVISVTTPEFNVTYPKIELSPVTWLPEESILT
EGTSLTFETKVKNTGTVDIRNKFDIDFVVDNVKIKTVTVEGLNAGEEKTVWARWMAQPGT
HNVSVVADASGTVTDSVYGVQVSAVVPYIKILYPDLNISDVQWSPLSVKYGQPVTFIARV
SNQSVTSIFKEFSVGLYINGKLSDEKKIKGLRGHSTAVVDLTCTPEVLGNADVKIVVDPY
NQIKQEPASDKVIRIWEGNLNIADALVAEIRPSPQEQNDEFMAHIYCTTDNFIPLEVKAK
RASDLSKLIGPNEGIRAYYILRKDDTTLLNGEIGFDYASSVFKGQIPLMRLASGNYILTI
EVGDGIESITSTSNIMIVEETVATVETDKKEYQHGETVHISGYFRYRDGTPLANQRIVLD
LCLEPRLPDPIISYINGKMIIKAWHAETLRFVNTDENGYFEYDFLPTTLGAGKWRVNAFA
YEKGVGSAAVSEFTVWGMTASPSTLSVVSSKNSSFSAFVSVNNMAKAEQSLTGVSAVLVD
LTPDSGVRAVMDTSTLSSVIGPNGKSGVMLNFNAPLNAADTAEYQVIFSSSEGAVATANV
KVYLRPAIPNPVTDPKGVKVGVNPGKIVTKRVTVTNKGLGEMENIKLLPPANLPWVKAIN
LEKTFLAPGESTSFDIVVNPPEGTPLGQYQDSITVTDGKYKALVTVGVEISSANIGSLTF
LVKDDMGQRVENAEVTIVGKEPYVQIIKGQKTTYYQNFYGRTDSNGIVTFEDVPIGEYTY
TIRAKAKKHVTGTANVMPMHESAMVEVTMETEPVQIEWSVVPTTIEDKYDIQLDLTFETN
IPSPKFGFVPPWLTVPKQVTEPIIIEATVINTGLVAVTDVTASVLRENNEDTGISIVGGG
YIGEIPAHGSVRVSIMVKPGYYNLKYGINDKTGLPYNAIVLRGKYVSFDSDTGLPVFHAN
QVTGMLPLQNPGDKNAVLKVKTGEGEEKMEVNLANEQLVEFDYFVPIEDDNIDYGDGAAG
NTQIASFKLSQTATLERQAFDATLKIENGYIKDALQNLEVRILITDTEGNNITGQNFIIL
TSLNGISALDGSASLSAGEQVTATWQLIPGDGLGGEDPEGQTYLARAIVSYYVNGRYVET
ETEPQEITIKPQPKIKLTYYVPGKILSGQPFRLGVVAENVGYGTAKNLVIESGQLEIKTN
QSGLLTQFEIVDTSFGSKTGNSFRLNLGDIEPQGRVSGYWLVRWIMYEEEERAKPFEGEF
RDFKATLTHRDYNGVQLNPLIVSVDTEIIGKDNIYGDKSGTDGVLSLIDVGNTGFPNYLI
NLDTGMKFPIYVPETLNVERQPDDENKILKFTVPAIEENPDAPEMPKYQVLMLKDPMPDT
PISSVTREMDAEGTEPVALGKNNVWKNNGNIYIVDEIPVLSIKPRDYNNEQSRYYHPSTY
TIDFTSGAVISAVEYARIYYDVNPKTLEVEEKYAYYDIGVYPNEGQMTRVRAAVYNEGRS
VEGGIVEFFATKLDFKGEVEEEIKIGEGRFNNLEPMNSTYVYVNWLPEKGGEYVLKAKIA
GNGSPQAVSEAKARVNFKPFADAGADFSVDVLKPTKFDASRSFDKDGYIQSFIWDFGDGE
SAFGVAPVHTYLNSGTYKVKLTVIDDNYVEATTEMQVTVNETRADLRVTDISLSNDNPKE
GERVKVTATIFNGGYAATDNSFLVGFYVNNMFKDYVRVTESINPGESKDVTFEWLNIAGN
HMITVVANDMGRLVDEADFDNNQLSRAVNTENAFFPNLKVTEFTWNGPEDGILDWNQEIT
LSAVIENDGMANAEKFNVSFMVNDKLIEAKVIDGLPYSKGRNTVKVSAVWKVNTEGVQTF
KVVADGPIPHIVEIERGDNEAVMQSPNIRLRYPDLTVQNVSIEPADMVIQPGQPLVIDVS
VANVGYADANKPFNVSVFADDVYIGTKEINEILKGTTSSAIFVWNRPVGGTKSIKVYVDE
NNSIREYNEGNNRFVYDLNIPLNVKLPKLSVEEIKTIPDDGTSKFGDTVVTQVRLKNIGD
AAINKPFTTSLYVNNVLAGSFSTSTVLEPGAVVTGEIEWTADYLPTAPYYELVVFADVYS
DIPMADREAAIKTAYYKVNDELRLELEETREVYTVKEDIEYFLKVTSTDELWRPLGTEDG
ISAELKLFKGQSAENDNPAGSPVFASLMEYDKVKGLFKTRIDRGLEAGDYIVQIIVNDGV
ERRNTVYSAFKLVPDYTVTVESEKQTYSVNEAIRINGKVTMGDGVTPIENAEVTIIIVGE
EEWRTDTKTDKNGCYTGEFDLPEGFGGSYSLRAEAKVNGAVKSSSTKVFYVEGLYVSLPQ
KLEITAGYEQSAKITLVNVGTIPLTAINIDKIWEESSDYVIAEFEGHLPETVEPGESVDL
NMVVKAGEEAVTGIYTLKLVVGCNEGYTYTSGIEVRVVEAKPEYYIEITGLKPSVTKSNV
SSGAIEGAVRPGEMITQIISVYNVGTGSIKDLHVTPPEKLPWITLTTSGTDLILPMGKGL
SIRDENARAIIAVNILPNEYVRPGIYEDVITLTSNAGTKTIPVKINVGAAHVGTITLEAV
DSNYAPVEDAKITLIGPHTSDWEQPMDEKVYQGVVTGKGVFRFENIPAGIYTLKVSASGY
ESVEESIIVPAVINEIPQKVVIEKKKINLGWSSSSIMNSIRKGLRSTEEIVLEQQINTVP
GKPQLVANFPGDEVTVRDTDLINGSVGGEFRIKNYSSEREIYWVEAEINYDNLDLPAYSV
NLSYGKITNNSVALGDFGPGESKNIRWSFDLSCLYYEADVIPTDTPDQYKVIAPKEVTPE
NFDAWLKGLSWLYYGNRVVKKISWDEETNTYIIGVPQNEDGSYTMPKGYIQRLFGKSYAL
DLTISISGTGLGLNGEEIEVSLNLPVRITYYPSDIIANPIPENDLKKFGVKEVSGNDEDG
EVRKYSRNFLKERCNMDVSDLPEPAGNAAASFGFSQDVAMVDEAFNAEFVFYNPYEDKKI
DDVRFKIIITDKPLDTMGNIADGGRSVTERFIIEADDIGNAMSNGEWMIVDKIGPDSNYS
FRYNIKSRAGLGDISGDYYAYVVYYYVLDGKVYQGYIGPKKFTIEPPPKLYISYKLNKIG
ESHYEIEAIVTNTGDGTARNVTVGLPVIPGAGKIEVIRIVSGDGFFQRDLSVLNIGNVYA
GETKSGTFEIVANGLEDWMNLPSLAVHSTQVNDNIVVSPMAIQKVWRGDFELLIQEVERL
EYNLQNLMNKTVHDLATVVVDVAEYVGEADEAERFSRAIDGMSAVISYVDFMVNLFDIFK
VAFGLDNEIPLNPFPSKLYYTPEEQKLLQQIGAQLREIKKEIEEAKRKLEAGDMTEEEKL
ALEEKIKDLEAEYEYNVERMQAIIGWPTSAGEIILERFGLNGVVELISWTDDLMQYKANQ
EETRKMMGELVRFAYDLLAEGISREEAIDKVIERINAKAFRLVDRKKVEDFYVNSPELDD
GQMDAMIQELIDKAEQLTIKELKSRVALELMEAKQLLDSYSYGRTNVPSYYPLDPLLEYL
KGLNKELEGMWSIGDGEMAQGVGMYKNVWVYHPYYGDLIPYQVKIGEYKEPLVESLKIQS
RGYSNLAARWEVNGIKAMLPAYDYFNLVIGFLPLSPYFGLMSSLFIDSMLMASLKSQISL
REIDLRYEQRKIFEDMISNTISTTAMAGTTLSRELSVANSVNGMFVAIDEWRKIDPPLPV
EVMSMVVPDIAVGPANEVGVGKAVLKIKNLYTGALTISPSLEVYSSAGLVAVPDTNSVTV
APGETVTVEIPFSIPRSTMMDAGGYVAVAFFGVAEPGTMSIGDVKGPYTSYFFVGTQEQI
EARRAYYKPSQPLGRDIEPGEQDEMFIESDGNLGEIRLFMAAKWGTTLEFAVYDPEGNVA
GNVEGVVRNEIQGAEINGLINSVDYIRIVNPVKGKYRVVVKAPDGEESESYSLNMLELPD
LGAVPDVSYPYVVVSTTKEVGFEFDVFESSMRYDIDKVSFSVGELRNEDGYVVPSGIFKF
TGYDGKTLVETVEAGMGVTAIATAELPEDTPDGTYVGLFTVTVEGRNLNPALVRQTGTMS
VSDSVYGWSEGFVSDIEGLEGYTYNVPIIIVLNTSIPQTPVLYPVSEPTEEAPYTVKIEG
EAESESGIMIWVDGTLQGMLKANSEGLFSTSLGLNAGSHEIYVTAFNKYGTQSEPSEEYT
VKIKGRYTQTPTAPTDLEAVYVGKERIELKWTPSTGSLRGYKVYRDGKQIGEVTTPAFID
TDITEGEIYIYAVTAVDIFGEESGQSNLVTVTVEKKEKPVLIVPTDIVAEATGQRTKVDI
GTAYVENMPDADVSNNAPEDYPLGVTTVVWTVKDKEGNVIVSGEQKVTVVDTTPPELMVP
MDTTVETTEEKVSVVLGEASAYDLVDGVVDVTNDAPDLYPVGTTIVTFTAVDSQGNKVSK
TVKVTVIKVEKPTEPPVEPPVNPPIEPPVNPPVNPPADNPSAGPVISEPVEVIPGPGGDK
ESDDEEKVQMDKEGNITVVPQTEGNAAISTVAARDLENAFEKFGSDPAGRKKVSIEIKKA
DGVEVYEQKLPSSIFTDTESGRKIEIKTPVATVEIPLDMFEEKDIEKAESISVRVSKVEA
SDLSMEQKAQIGDRPVIQLEVLVDGRLINWRSNKTSIKISVDYTPKGDELKKTDRIFVWY
VGDSGKLSAIPMAVYKEDAGKVIFSVQQSGKYAVAYRYKSFDDLKGYDWAKEQIEILASK
GIINGTSSTKYSPGLNITRADAVILIVKALGLEAEFTENFDDVSADKYYYEAVGIARSFG
IVTGVGNNKFNPETPITRQELMVIVNRALKVVGINLDTGDVSELEAFKDFSEISPYAVES
VAALVKAGIIKGDDNKLIAPLRNITRAETAVIIYKLFEKMTELLQ
Download sequence
Identical sequences A3DET8
WP_011838033.1.31213 203119.Cthe_1235 CmR98 gi|125973750|ref|YP_001037660.1|

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