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Domain assignment for WP_011894873.1.22401 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011894873.1.22401
Domain Number 1 Region: 13-156
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 8.6e-46
Family Ribonuclease PH domain 1-like 0.000000404
Further Details:      
 
Domain Number 2 Region: 329-500
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.83e-44
Family Ribonuclease PH domain 1-like 0.00000166
Further Details:      
 
Domain Number 3 Region: 157-268
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.78e-27
Family Ribonuclease PH domain 2-like 0.00000971
Further Details:      
 
Domain Number 4 Region: 482-586
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.42e-22
Family Ribonuclease PH domain 2-like 0.000021
Further Details:      
 
Domain Number 5 Region: 594-681
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 2.23e-19
Family Eukaryotic type KH-domain (KH-domain type I) 0.0035
Further Details:      
 
Domain Number 6 Region: 273-352
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 1.62e-18
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.00022
Further Details:      
 
Domain Number 7 Region: 662-730
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.00000000000000307
Family Cold shock DNA-binding domain-like 0.00058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011894873.1.22401
Sequence length 756
Comment polyribonucleotide nucleotidyltransferase [Mycobacterium gilvum]; AA=GCF_000184435.1; RF=representative genome; TAX=278137; STAX=1804; NAME=Mycobacterium gilvum Spyr1; strain=Spyr1; AL=Complete Genome; RT=Major
Sequence
MSVVEIEEGVFESTATIDNGSFGTRTIRFETGRLARQAAGAVVAYLDDETMLLSATTASK
QPKEHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFISGLR
NEIQVVVTVLSLDPKDLYDVLAINAASASTQISGIPFNGPVGGVRVALIDGQWVAFPTVE
QLEKAVFDMVVAGRKVGDAGNEDVAIMMVEAEATDKVIELVAGGAGAPTEAVVAEGLEAA
KPFIAALCDAQAALAGAAGKETAEYPVFPDYAEDVYYSVASVATDALSEALTIAGKEARD
DRTNEIKAEVVERLAEQYAGREKEIGAAYRSLTKKLVRQRILTDHFRIDGRGVTDIRALS
AEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPYSTG
ETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVCASTL
SLLNAGVPLKAPVAGIAMGLVSDDVEVEGGGVERRFVTLTDILGAEDAFGDMDFKCAGTK
DFVTALQLDTKLDGIPSQVLAGALAQAKDARITILEVMAEAIDEPDEMSPYAPRITTIKV
PVDKIGEVIGPKGKMINSITEETGASISIEDDGTVFVGASNGEAAQAAIDKINAIANPQL
PKVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRINKVEDVAKVGDKLRVEIA
DIDNRGKISLVLVAEEEAGAATPEAPAPADAATSSS
Download sequence
Identical sequences A4TCH6 E6TFK2
gi|315444934|ref|YP_004077813.1| WP_011894873.1.11461 WP_011894873.1.22401 gi|145224603|ref|YP_001135281.1| 350054.Mflv_4023

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