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Domain assignment for WP_012086133.1.7041 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_012086133.1.7041
Domain Number 1 Region: 477-706
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 4.32e-25
Family Multidrug efflux transporter AcrB transmembrane domain 0.005
Further Details:      
 
Domain Number 2 Region: 118-333
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 1.07e-23
Family Multidrug efflux transporter AcrB transmembrane domain 0.009
Further Details:      
 
Domain Number 3 Region: 965-1036
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.0000000000337
Family Cna protein B-type domain 0.0055
Further Details:      
 
Domain Number 4 Region: 882-955
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000000000471
Family Cna protein B-type domain 0.01
Further Details:      
 
Domain Number 5 Region: 796-890
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000000153
Family Carboxypeptidase regulatory domain 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_012086133.1.7041
Sequence length 1058
Comment CnaB domain-containing protein [Kineococcus radiotolerans]; AA=GCF_000017305.1; RF=representative genome; TAX=266940; STAX=131568; NAME=Kineococcus radiotolerans SRS30216 = ATCC BAA-149; strain=SRS30216; AL=Complete Genome; RT=Major
Sequence
MATLLYRLGRFSARRHWLVLAVWAVLLAVLGGLAYGVEKTAATDTSFSIPGTEASEGLDL
VEEKFSAGANDATATVVFQAPAGQTLTTAENAGALQGVLAQLRGIEGVVSVSDPLAPQTP
MVSRDQTIASSTVTFDGLVGDVTPEQVEALQAATDHDAGPVRVEMTSQVVTTEAGHTSEA
IGVAVAALVLVLTYGALAAAGANLLTAGIGVGAGILGITALGNVVSLSATTPALAGMLGL
AVGIDYALFVFARTRTELRRGVGLDQAIAKATGTAGTAVVFAGTTVVIALVGLSVVNIPF
LTQMGLAAAATVAIAVVVALTAVPAFLKVLGLRVLPKKERHRDPAGLRAAAESDDHALAD
LAGPGLLGRWARGVTGHPVLALLAAVVLVGAVAIPVASMRTALPSAENDDPASSSRQAYD
LLVQGFGPGSQSTLIVLVNGDDAAAVATAAGEVATRVQGLDDVAAVLPGIPSADGTAQLI
TVVPASGPTDEKTSELVRDLRSATSGTDGAEVLVTGQTALDIDVTDSLNDALPVYIALIV
VLALFLLIMLFRSLAVPLLATVGFLLSLGASLGAVVAIYQWGWLSDVFGVAQPAPLLSFM
PVLVVGILFGLAMDYQMFLVSAIHEQHAHGRRPKDAVLAGFRRSGPVVVAAALIMSGVFV
GFATSGDQIIGSIGMALTVGVLADALVVRMVIMPAALTLLGDAAWWMPRWMQRLVPNVDA
EGRSLEALLAAGDTGATATATAPAPEAAPSRADSPAEVPVPREERRHPVDPALAATPHGM
PAEQRVARVAADLPLGIVGLVTDPAGHPLAGAALTITDQAGRQVARAGSDEVGLYELPLT
AGGTFVLIVAAAEARPAAHLVAVSDRTVRHDVRLVGNAALHGVLTGADGTQPVGGGVLTL
LDVRGDVVATTRSDASGQYRFGDLVAGSYILSVLGESFRPVAQAVEVGPGADLAVDVRLS
HGGRLIGQVSAGSDGRGVPEASVTLVDDGGAVVDSATTDTGGSFHFDDLSQGRYTLTAAG
HPPVATAVEVEEGGHREVTVELGGPRRADGGPGSPAAR
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Identical sequences A6WFJ0
266940.Krad_4116 WP_012086133.1.7041 gi|152968059|ref|YP_001363843.1|

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