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Domain assignment for WP_012618686.1.75456 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_012618686.1.75456
Domain Number 1 Region: 1211-1355
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.07e-31
Family Family 6 carbohydrate binding module, CBM6 0.0015
Further Details:      
 
Domain Number 2 Region: 529-615
Classification Level Classification E-value
Superfamily PKD domain 6.93e-29
Family PKD domain 0.0002
Further Details:      
 
Domain Number 3 Region: 613-699
Classification Level Classification E-value
Superfamily PKD domain 1.06e-28
Family PKD domain 0.00028
Further Details:      
 
Domain Number 4 Region: 698-783
Classification Level Classification E-value
Superfamily PKD domain 2.35e-27
Family PKD domain 0.00037
Further Details:      
 
Domain Number 5 Region: 358-446
Classification Level Classification E-value
Superfamily PKD domain 8.63e-27
Family PKD domain 0.0005
Further Details:      
 
Domain Number 6 Region: 446-531
Classification Level Classification E-value
Superfamily PKD domain 9.03e-26
Family PKD domain 0.00026
Further Details:      
 
Domain Number 7 Region: 813-916
Classification Level Classification E-value
Superfamily PKD domain 3.79e-22
Family PKD domain 0.00055
Further Details:      
 
Domain Number 8 Region: 976-1052
Classification Level Classification E-value
Superfamily PKD domain 0.0000000000000196
Family PKD domain 0.0011
Further Details:      
 
Domain Number 9 Region: 99-309
Classification Level Classification E-value
Superfamily YWTD domain 0.0000000000249
Family YWTD domain 0.019
Further Details:      
 
Domain Number 10 Region: 1104-1180
Classification Level Classification E-value
Superfamily PKD domain 0.0000000000759
Family PKD domain 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_012618686.1.75456
Sequence length 1356
Comment carbohydrate-binding protein [Methanosphaerula palustris]; AA=GCF_000021965.1; RF=representative genome; TAX=521011; STAX=475088; NAME=Methanosphaerula palustris E1-9c; strain=E1-9c; AL=Complete Genome; RT=Major
Sequence
MQIEAFIGSSPNFQYTNTKSDLVLMIVTTEKMRWVLLMIVLVAICCTPVSASSLFVGVAP
ASTPVPSTNSNLVSELSVSGYSAQYQQNVSWPSENFLLKGLAEDAPNGTLFVTDRSTTSV
TILNATTMAVQGSPIPLSGISIDYPLNSVYDPEHSRLYIYDNGNQDLVGFAWDSTNQTLN
YDGMTIVLPERCSGLALDSVANILYVLPEDPDPDIGSIHRYSTVTGASLDDISLGVWGLS
QISSLAVDSENHCLYMKAYYSLLDSECMFSWNTSTSNFNTGIASVSDSDTIMALAVDPAS
HYLIAATKSQNLGNNLYYPMIEFYDRSMNQMDSALACPSDFPGVSRRGNLPDDYYLAVLP
ETLAPPVANFTADVTNGTAPLEVEFTDQSTGSPDSWHWEFGDGTTSTDLGFADHTYTEAG
NYTVNLTVANPGGSNSTTKTNYITVHAPIFAPVVNFTANVTNGTSPLTVGFTDLSTNSPT
DWLWEFGDGTTSTMQNPVHTFTDIGNYTVNLTAANTGGNNTSIRTDYITVTQVPVPVANF
SANVTNGTSPLSVGFTDLSTNSPTDWHWDFGDGTTSTMQNPVHTFSDIGTYTVNLTATNA
GGNATQTKTDYITVTQVPVPVANFSANVTNGTSPLSVGFTDLSTNSPTSWLWDFGDGTTS
TMQNPVHAYMAAGNYSVNLTATNAGGNASQNKTDYITVHAPVFAPVANFTANVTNGTAPL
SVGFTDLSIGSPATRSWNFGDDNTSTEQNPVHTYTAAGNYTVNLTVTNAGGSNTSVKTNY
ITVHAVVPPTTAPTTTVPTTAPTTPPTTVPTTVPTRIPTTIPTTIPVTPTPTATVPPLVA
NFSANVTTGQTPLAVQFTDATSGSVQQYFWQFGDGGASFDKNPVHTYSAAGTYTVSLVAI
GSTGADVKTIPQYITITTPGTPTVSPTATAPTQTVTTTVTATTPAPTTTTTVTPTVTLTT
ATTTVTPLPTSSGHDLPLANFVVTYQAGSGSMGIQVTDASTNATTLKYDLGDGTTTAYKN
FKYTYWQPGTYTITLIATNDAGSSTKTVAVTVPAGSPTITTIVPTVTTPAPTMTVSPTTT
VTLPVTPTVTSTVTPTPTPTNPNLPVANFTVTFPGGPGSMGIQVINTAVNATSVHYNLGD
GATTAYPNFTYTYWQPGTYTINQTATNAAGSTNKTLVVTIPAVLTPTTTTTPAPTTISPT
VTVTGSAYNGPHTIPGTLQAEDYDLGGEGVAYHDTTAGNEGGVYRHDDVDIEQLDTDGSP
NVGWIRSGEWLGYTVNVSTAGTYTAGFRVASSHSGSSIQVYVDDGTTPVATVSVPNTGDW
PAFRTVSVPVTLPAGQHRLRLAFPTDYVNINWISFA
Download sequence
Identical sequences B8GDL6
521011.Mpal_2068 gi|219852658|ref|YP_002467090.1| WP_012618686.1.75456

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