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Domain assignment for WP_012618688.1.75456 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_012618688.1.75456
Domain Number 1 Region: 657-802
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 7.53e-32
Family Family 6 carbohydrate binding module, CBM6 0.0013
Further Details:      
 
Domain Number 2 Region: 205-294
Classification Level Classification E-value
Superfamily PKD domain 2.88e-24
Family PKD domain 0.00049
Further Details:      
 
Domain Number 3 Region: 292-377
Classification Level Classification E-value
Superfamily PKD domain 4.97e-23
Family PKD domain 0.00035
Further Details:      
 
Domain Number 4 Region: 384-458
Classification Level Classification E-value
Superfamily PKD domain 1.03e-18
Family PKD domain 0.0012
Further Details:      
 
Domain Number 5 Region: 481-556
Classification Level Classification E-value
Superfamily PKD domain 0.000000000000288
Family PKD domain 0.0012
Further Details:      
 
Domain Number 6 Region: 127-218
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000000209
Family Pre-dockerin domain 0.044
Further Details:      
 
Weak hits

Sequence:  WP_012618688.1.75456
Domain Number - Region: 34-78
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.000157
Family Pre-dockerin domain 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_012618688.1.75456
Sequence length 802
Comment carbohydrate-binding protein [Methanosphaerula palustris]; AA=GCF_000021965.1; RF=representative genome; TAX=521011; STAX=475088; NAME=Methanosphaerula palustris E1-9c; strain=E1-9c; AL=Complete Genome; RT=Major
Sequence
MTTQLQRLIRPLIVLILVSSLLLIPPVTAMHTETLTGTVVDSYTHQPINHVEITTSQVPG
PHFYTDSNGVFSIEVDNSQSGISYTLGLTPPEAADYQYRDREITYSFSAAEISARSKDLG
QIELTRKVSGYVTDSVTGQPLSGVHVSLGPSSGTSDGNGYYYIRLQDAGLNQNGLSFRGV
YYLIATKDGYLSSSIPFGIYDGDGTHLYNIQLTRAFTANFYAFGHVGQAPYSVRFMDQSV
GSPTAWKWDFGDNTTSTEQNPTHVYNRTGAYNVALTASNDQASDTCTQYRCVIVNDVPVA
NFTTNATSGQTPFSVQFTDQSTSGADGYQWQFGDGATSTEQNPVHTYTTSGSYTVMLTVS
EPNYGSVFVQKPGYITVGDPSTIGFSANVTTGLSPLPVQFNESVNGSVQYSFWHFGDGST
SMDSNPVHVYDTPGQYTVSLMTVGSNGTETKTIEDFINVTAPVTPTVTPTSTVTPTPTGA
LPVANFTVMAGAPGSLAIQVTDTSTNATSVRYDLGDGTTTAYRNFQFTYWQAGTYTIEQT
ATNAAGSSMKTVEVIVPATTPTPTITFPPIGGDQGWYTVHCNVDGATVIFDQTTMGTIAQ
GILKIPVYVTGSPYGTYTVQKDGYSTVSGVITEHPGKDQNVDITVHLTPTSTPYNGPHTI
PGTLQAEDYNLGGEGVAYHDTTAGNEGGAYRHDDVDIEQLDTDGSPNVGWIRAGEWLAYT
VNVTTAGTYNAGFRVASSHSGSTVQVYVDDGTTPVATVSVPNTGDWPAFQTVSMPVTLPA
GQHRLMLKFPTDYVNINWISFT
Download sequence
Identical sequences B8GDL8
gi|219852660|ref|YP_002467092.1| WP_012618688.1.75456 521011.Mpal_2070

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