SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_013369223.1.14980 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_013369223.1.14980
Domain Number 1 Region: 31-88,138-198
Classification Level Classification E-value
Superfamily SMI1/KNR4-like 0.0000000000000589
Family SMI1/KNR4-like 0.016
Further Details:      
 
Domain Number 2 Region: 213-393
Classification Level Classification E-value
Superfamily ARM repeat 0.000000181
Family PBS lyase HEAT-like repeat 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_013369223.1.14980
Sequence length 444
Comment hypothetical protein [Paenibacillus polymyxa]; AA=GCF_000164985.3; RF=representative genome; TAX=886882; STAX=1406; NAME=Paenibacillus polymyxa SC2; strain=SC2; AL=Complete Genome; RT=Minor
Sequence
MWFGKNETQLDRIKDKLNQAMHKDKDFSVFGASSHQYRVKEKLTAKELADWQAHNQVILP
EPYALFLTNIGNGGAGPYYGIYPIEKATSYTEHQALLAKSVLHLGMAKEEWNHLIEPLTK
DEDIPDEEYDDARNKVLGGMLCIGTQGCEYDMYLVLEGKYRGRIVYTSDFHPDHPFFFVY
EDSFLDWYERWLDEIILDYDIGWFGSRMPGDENALIQMYQSAPNEEIQAKALDGMFKFKE
VAQPTLGFLKNIAEQSPKNRTTAVWLICKTSFDTGRKYLLELLQSDEHRDFLQALTILHA
SSKTANLTEFIPVILQSLDRIHDPETLRYAGYILEDYGEITLRNFAPFLCHADPKMQTTA
IYAARSCENKQGSWQIIEQMLIGSDPQVLKNMILYWGIIPHEKLLPYYKAVWPEYKKNPN
FKEKFIGCLRELHLPDDYFNKDES
Download sequence
Identical sequences E3EF64
WP_013369223.1.14980 WP_013369223.1.91857 gi|386039250|ref|YP_005958204.1| gi|310640067|ref|YP_003944825.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]