SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_013370603.1.91857 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_013370603.1.91857
Domain Number 1 Region: 124-296
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 9.95e-44
Family Histidine kinase 0.0025
Further Details:      
 
Domain Number 2 Region: 327-450
Classification Level Classification E-value
Superfamily CheY-like 4.27e-32
Family CheY-related 0.011
Further Details:      
 
Domain Number 3 Region: 56-137
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 3.14e-21
Family Homodimeric domain of signal transducing histidine kinase 0.002
Further Details:      
 
Domain Number 4 Region: 449-570
Classification Level Classification E-value
Superfamily Histidine-containing phosphotransfer domain, HPT domain 1.01e-20
Family Phosphorelay protein luxU 0.09
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_013370603.1.91857
Sequence length 577
Comment hybrid sensor histidine kinase/response regulator [Paenibacillus polymyxa]; AA=GCF_000237325.1; RF=na; TAX=1052684; STAX=1406; NAME=Paenibacillus polymyxa M1; strain=M1; AL=Complete Genome; RT=Major
Sequence
MKEPTAEMAVLRRTVEQLTDEVLKSKAEEEKLLNEFSAMNNELVNLQRQLAKSNAELKRT
KEEAIRANDLKSTFLAVVSHEFRTPMNGILGMIEMLASSKLSPDQRQAIGVIRESASLLL
NMINNLLDISKVEAGQMELEIGNVRVQAIMSHVAQLLEPQIYQMGNQLSIETDPGVAEHL
EGDSARIMQILLNLLNNANKFTSEGNLVVRTKLVEETKDSQRVRFEVQDSGIGISPEDQD
KLFQPYVQAGEGGASQYGGTGLGLWICSSFVKLMQGEIGVVSEEGQGSTFWFEIPFRKAS
GQADKIEKHENGELTARSELLREHIHSQVILVAEDNRMNRQVVQLQLNHLGFQHIDFAED
GQAAVRAASERSYACILMDHHMPLLNGHDATKAIRQWEVENQQPPVTIISLTGNVSEEDQ
ARGREVGVNDYLTKPVTIENLSEKLVKWLPVPESEPILDEDVIREIMLLDEDGSTGLLES
LVEMYTSDTPAKINKLKELVAAGEATKVVEAAHELKSGSVSLGVGRLSKLLSDIEQLARE
NRLENTQVKLSALQSVYQATCLELERYIHQSRLIPPC
Download sequence
Identical sequences E3EIW7
gi|386040503|ref|YP_005959457.1| WP_013370603.1.14980 WP_013370603.1.6267 WP_013370603.1.91857 gi|310641469|ref|YP_003946227.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]