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Domain assignment for WP_015796424.1.73754 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_015796424.1.73754
Domain Number 1 Region: 6-151
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 8.1e-46
Family Ribonuclease PH domain 1-like 0.000000177
Further Details:      
 
Domain Number 2 Region: 321-492
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.16e-43
Family Ribonuclease PH domain 1-like 0.000000409
Further Details:      
 
Domain Number 3 Region: 152-259
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 2.42e-27
Family Ribonuclease PH domain 2-like 0.00000492
Further Details:      
 
Domain Number 4 Region: 474-573
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.17e-24
Family Ribonuclease PH domain 2-like 0.00000809
Further Details:      
 
Domain Number 5 Region: 575-688
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 7.17e-19
Family Eukaryotic type KH-domain (KH-domain type I) 0.0026
Further Details:      
 
Domain Number 6 Region: 264-344
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 2.22e-18
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0000464
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_015796424.1.73754
Sequence length 737
Comment polynucleotide phosphorylase [Catenulispora acidiphila]; AA=GCF_000024025.1; RF=representative genome; TAX=479433; STAX=304895; NAME=Catenulispora acidiphila DSM 44928; strain=DSM 44928; AL=Complete Genome; RT=Major
Sequence
MSEGVFTTEAVIDNGPFGQRTVRFETGRLARQAAGSVVAYLDEETMVLSATTASKSPKDS
LDFFPLTVDVEERMYAVGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFAKGLRNEVQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIQDRWVAFPTHTELADA
VFDMVVAGRTLEDGDVAIMMVEAEATSQTVSLVAGGSTAPTEEVVADGLEAAKPFIKALC
VAQQELASQAAKATAEFPRFLDYQDDVLEAVSATAKNELSNALTIAGKHEREEELDRVKA
LVVEKLAQQFEGREKEIGGAFRALTKKLVRERIIRDQVRIDGRGVRDIRPLSAEVEVVPR
VHGSALFERGETQILGITTLNMLRMEQQLDTLNPETRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLVSAEIDGKTEYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQAKDARLHILDVMMEAIDVPDEMSEFAPRIISVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGASNGAAAEAARVTINQIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGRDGLLHVSQLKKLAGGKRVENVEDVVKVGDKLQVEIAEIDSRGKLSL
IPVLPDEESKPAEAKAE
Download sequence
Identical sequences C7QFC2
WP_015796424.1.73754 479433.Caci_7876 gi|256396976|ref|YP_003118540.1|

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