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Domain assignment for WP_016332609.1.6660 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_016332609.1.6660
Domain Number 1 Region: 94-264
Classification Level Classification E-value
Superfamily TPR-like 1.9e-40
Family BTAD-like 0.00037
Further Details:      
 
Domain Number 2 Region: 255-515
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.7e-30
Family Extended AAA-ATPase domain 0.02
Further Details:      
 
Domain Number 3 Region: 798-971
Classification Level Classification E-value
Superfamily TPR-like 5.94e-18
Family Tetratricopeptide repeat (TPR) 0.026
Further Details:      
 
Domain Number 4 Region: 2-89
Classification Level Classification E-value
Superfamily C-terminal effector domain of the bipartite response regulators 0.0000000000068
Family PhoB-like 0.0012
Further Details:      
 
Domain Number 5 Region: 714-824
Classification Level Classification E-value
Superfamily TPR-like 0.00000000000854
Family Tetratricopeptide repeat (TPR) 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_016332609.1.6660
Sequence length 983
Comment AfsR family transcriptional regulator [Amycolatopsis orientalis]; AA=GCF_000400635.2; RF=na; TAX=1156913; STAX=31958; NAME=Amycolatopsis orientalis HCCB10007; strain=HCCB10007; AL=Complete Genome; RT=Major
Sequence
MRFSLLGPVEVAGPSGPIALPGVKPRTLLAALLLGYGRTVPAERLIGVVWGEEPPTTARA
VVQTYVATLRRAFDAAGLPQVIVSDRNGYRADVAEDVLDVRMFERLVERGRQAAQGGDHT
GAADLFRSGLALWRGPALGGIGESFLRAEASRLDELRLTVVEERVDADLAAGQGPRLLAE
LTELVALHPTRERLRGGLMVALYRSGRQAEALDVYERGRKVLADELGIDPGPELRQVHES
ILRSDAALLPAVTSRTPRQLPSPPPDFTGRAPELAELRATLVRPGEMPVAVVSGAGGVGK
STLVHRIAHEIAEHFPGGQLHLELHGSTGSPATAEEVLGRVLRDFDPATTPPGSLDERVA
RYRTVLAGTRTLVVLDDAANEAQVRPLLPGGPGCAVIVTSRNRLPALAGATFCELGVLPA
DAALDLLTRIVGAERASTEPASAAEITELCGQLPLAIRVAGARLVSRRQWSLSRLANRLA
QEQRRLDELVVGDQEVRASINLSYTLLPKAARTALRRLGSLGLAHFPAWVAAAALESDPD
DAEQVLEDLVDVSLLEVDGVDPLGLMRYRLHDLVRLFALERAVEEESAADRAATVERVLG
GWIWLVERINETLPPVVPSIQGISRLGRPVGEEIARRVVARPYEWFRAEEEAMTTAVELA
AALDLVDIAVGLSSALCGTAFGGHNRVLDDSLGSWRRTHDAALTAARRTENALGEATLLA
GLGQLYYEHDDFPRSRAHLSQALSMFRAAGDVRGEAATLAALGAACREQGYLPEAVHFLD
RAGRMWSGLDDPGAMGHVHRLAGTVRLELGEYPGALTALTEARASFAAAGSRRGEGLTLR
SLSLYHRARGEWAEAEECARAALAVFEGTEDRMLAAYSERALAKALLRRGDSVAARRLAE
NALEVCRELGDAFGHACTLRVVGEVHLAEGRLYQAKDCLEDSLRRWTDLRAELFRARTLR
TLAEVHDALGDVRAGERMTAEAC
Download sequence
Identical sequences R4SMN5
gi|506930779|ref|YP_008011217.1| WP_016332609.1.6660

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