SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_020073738.1.45593 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_020073738.1.45593
Domain Number 1 Region: 458-517
Classification Level Classification E-value
Superfamily Type I dockerin domain 0.000000144
Family Type I dockerin domain 0.0026
Further Details:      
 
Domain Number 2 Region: 40-209
Classification Level Classification E-value
Superfamily NHL repeat 0.0000366
Family NHL repeat 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_020073738.1.45593
Sequence length 520
Comment hypothetical protein [[Clostridium] sporosphaeroides]; AA=GCF_000383295.1; RF=representative genome; TAX=1121334; STAX=1549; NAME=[Clostridium] sporosphaeroides DSM 1294; strain=VPI 4527; AL=Scaffold; RT=Major
Sequence
MNFGRKSSVLVALALTAALLLTAIGTRSIFAGASATAVSLVLPSGFSNPEGMELLSAGEK
HYLLCGTEDEQSFVLLLDENGQVVDQSTVSAHMVYPLYRKGNLSLVCPYRGGSKEEFGVG
VYTYTVRRDELDTKLFIDLPQIYVEGRNDFDVDSAGRYYAPHTPMEETILLFEYSGWLLN
QIASSHGEFSSLAVSPDDVLYTRYSDESKLGVKVLPDSIREETQLEEPPLFDSEIPQGSF
RFLNADLVIDESGDLFDVQPDTHLFSRTAETGGDLNCAAALTSGRVLVKTGDSRADAFEN
GELIGSYEFGEELISLAADEDRAAAVVRGEEGWYFVPVTDDLLEESDGSSRGESSAEGSS
QTGGSSSPEESSQPPTGSDQTAEIFSLSESARIDRDAQKIYLPANTTYAALKNMLRVQNG
TLEAQKPNGVPLVSGYVMTGAVLLAKNESGEVTDGLTAVVPGDLSGTGRLTQTDSKLLYR
VLNGTAELDEASFSAADLDGDGQLTTADLLILKKELSKSP
Download sequence
Identical sequences WP_020073738.1.45593

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]