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Domain assignment for WP_020457967.1.31213 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_020457967.1.31213
Domain Number 1 Region: 30-330
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.51e-81
Family Pectin methylesterase 0.00000371
Further Details:      
 
Domain Number 2 Region: 500-567
Classification Level Classification E-value
Superfamily Type I dockerin domain 8.04e-18
Family Type I dockerin domain 0.00057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_020457967.1.31213
Sequence length 567
Comment pectinesterase [Ruminiclostridium thermocellum]; AA=GCF_000015865.1; RF=representative genome; TAX=203119; STAX=1515; NAME=Ruminiclostridium thermocellum ATCC 27405; strain=ATCC 27405; AL=Complete Genome; RT=Major
Sequence
MIKNKKILLLLCINLCLFFLLINRIQLVSSAAVNADIIVAKDGTGNFTTIQAAIDSVPSN
SSKRTVIFVKNGTYKEVVTIRKNNIHLIGESNTKTIITYDNYAGKLKPDGTTYGTSGSAS
FYLYGTDTILENITIENSFDESIDVKDKQAVAAYIRGDRQIIKNCIFIGNQDTLYAHSGR
QYYVNCKIIGDTDFIFGGATAVFENCEIVSTPKGGYVTAASTDLENYGFLFLNCRLTSDA
PKNSTYLGRPWRPNAYVVYKTCYLGAHIKESGWTSMSGNLPENARFFEYKNTGPGAVVNS
SRRQLSYAEAAKFTPQNLLKGTDNWNPVALVSQTSTLTPTQKPTSTPAPTPMDGQLIKSL
TVKDSANSSNWSIQSNLRVGDTVFGDRTYKFVTIPNEFLGSEWIRTACDSKKSTEDLAYF
TAKADITVYVGLDSRVATIPSWLNDWTKTSLTITDDGSPQVTYNLYKKNFSANSVVTLGP
NGASSGAVNYIVIVKQNNQNIVYGDLNGDGLVNSSDYSLLKRYILKQIDLTEEKLKAADL
NRNGSVDSVDYSILKRFLLKTITQLPV
Download sequence
Identical sequences A3DJL8
WP_020457967.1.31213 203119.Cthe_2949 gi|125975430|ref|YP_001039340.1|

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