SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_029815738.1.45964 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_029815738.1.45964
Domain Number 1 Region: 243-413,585-648
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000536
Family ABC transporter ATPase domain-like 0.026
Further Details:      
 
Domain Number 2 Region: 1-125
Classification Level Classification E-value
Superfamily PHP domain-like 0.00000000275
Family PHP domain 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_029815738.1.45964
Sequence length 714
Comment hypothetical protein [Vibrio parahaemolyticus]; AA=GCF_000490295.1; RF=na; TAX=1394642; STAX=670; NAME=Vibrio parahaemolyticus S106; strain=S106; AL=Contig; RT=Major
Sequence
MKIDIHVHTRKTKQGDATTREVSPEDFSRIVQSTDVKILAITNHNVFDLEQFNQMEEKLD
GAAQIWPGVELDVLDDGRRSHLIVVVSPQNRDKFSEVVNHVTEGQTPDNFVISIENTVKF
FDELDPLYVAHYMGKKPDMSEETIGKLLAGGVNPKRVIKEATNSISAGIFIAHGHSSLYG
SDIQNWNKYTEEAKSLPELRLSVDSFEHFCLLLEKDVSTIDTAIQRKNSEELTLIPFEDE
TKVKIRVFNDINIIFGPKGTGKTKILKSIAKHYSNRGVKASLFESAPDKLADRFDIKGEN
VKSIIDLSEVDCCSEEINRIKKAKETDVTSLNKYVEFFNSENKNKNAKKMKVKDLPKLTS
ENSDSKFNEYQDAYKKIQDMLVFLKQNGPVNEVTNEQERTQLRESLNYVSSKLSEGAWEL
YSDWKSSQLTDSISKRFREEVTRKTGERSKPSGTGFKEFASNRINIEKDARKILSNIGKN
IKDEVEKVGMLGPEKGELKCVTSFKFQQGDIHDAKYLSITSMRKTDQKEFIQIIKDIKVK
STSDDLFDSITQLNEIPDIDKIKSLSDLLLFWRRFSLQGEQYSPSNGECSMLNLHNELDE
EKEIYILDEPERSLGNEYINDVIIPLINDKAVQGKIVVISTHDANVAVRTLPYNSIYRCH
DIDGYATYVGNPFSNSLVHAVDEGKILDWKKISMKTLEGGQSAFGERGKIYGQN
Download sequence
Identical sequences WP_029815738.1.45964 WP_029815738.1.7474 WP_029815738.1.81050 WP_029815738.1.83010

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]