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Domain assignment for WP_070974672.1.85560 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_070974672.1.85560
Domain Number 1 Region: 2358-2592
Classification Level Classification E-value
Superfamily PMT central region-like 1.57e-38
Family PMT central region-like 0.004
Further Details:      
 
Domain Number 2 Region: 3723-3929
Classification Level Classification E-value
Superfamily beta-Roll 9.55e-17
Family Serralysin-like metalloprotease, C-terminal domain 0.0033
Further Details:      
 
Domain Number 3 Region: 3638-3748
Classification Level Classification E-value
Superfamily beta-Roll 0.0000353
Family Serralysin-like metalloprotease, C-terminal domain 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_070974672.1.85560
Sequence length 4001
Comment RTX toxin [Photorhabdus temperata]; AA=GCF_001854735.1; RF=na; TAX=574560; STAX=574560; NAME=Photorhabdus temperata; strain=Hm; AL=Contig; RT=Major
Sequence
MGKSSNRSTEYFFTGKYYDDNDGNDITAIGVGGEVYAYGGNDDVTVGSFKVDVYHTDGDL
SVKGASGYTGISKTGNGGLSFAGAAGAAFINHTGDTGNLNYSGAAGYNKLVRKGLSGDTN
FKGAGGYNKLWHETNRGDLYFAGAGAVNHIDRTWFDRYQGSRGNVTFNGAGAANSISSRV
ESGNITFNGAGADNHIVLKGKEGNIILRGAGASNRIERIRQNRDGYEQTRGDITFEGVGG
YNKLYSDVAHGNINLSGAGAYNEITRVGTNSDFYGETLEFAKSEEIVLTTATMGGSWIQE
SRQVTGIKSTIEPDTYLFAFADKMYTKISKVRLQNNPTTGRLGYHATSWYKAGNHLENLA
AKDISSGNGFTAVNTNXAYRLSSLLFEHQQPVKIHAVEENLLIDQWVTYAGGIVVKVEDI
SLGDAKMGGYAISSDGSKVDVFXVKSNRRSNTYVYAKVMGPYTKVVEVQLKNDFDTGQLK
YKATTWYKTGDHTGNLANEQFSYDNGYTSIGHGYTLSQLQYSANTVRRISHRLVHSEEYS
QKDLVESFTSSGYINFNGAGGGNVIKSNVTQGNVNFKGAGVANVILHGSKFGDTNFDGAG
AANVIVKSGEKGDLTFRGAGLANVLVHQGQSGKMEVYAGGAVNVLVRVGDGRYLAHLLAY
GNISIHKGNGDSRVLMLGGYNTHTQIGDGSANWFGAGGFNVITQAGKGAISSVLLGGANV
LTKLGTGDLVSGMFGGANIITHISDETETSNTTAIVLGGANILTKKGKGNAQAVMGGGAN
VLTHIGDGNTTGVMLGGANILTKVGHGDTTGIMFGMGNVLTHVGDGLTLGVMAAAGNIFT
KVGDGTSIAAMIGAGNLFTHVGKGDAWALMGGAVNVFTKVGDGNGLALMVAAGNVFTHIG
DGTSVALMLAKGNIATKVGNGMTLAAMIGKANIFTHVGDGNTFAAMIGGANVLTKVGNNL
TAAVMVGKANIYSHVGNGTSIGLFAGELNVMTKVGEGKTLAAMFGKANIMTHVGNGLTGV
LALGEANIVTKVGDDFMGVVAVAKANVITHIGNATTAGILFGKGNILTKEGDGTTVGLLI
SDVGNVMTHVGDGTTVGFAKGKANLITKIGDGTGVNAAWGEANILTQVGNGDRYNFAKGK
ANIITKVGDGQEVTVVQGDANMITHVGNGDDYTGAWGEANVITKIGDGRNVVLAKGKANI
VTQVGKGESFNALWSEGNIVTKVGDGMQVTAAKGKANVTTTVGNGLSVTAAYGDANINTQ
VGDGVSVNVAWGKYNINTKVGNGLNVAAMKGQGNANIQVGHGLYVNASYARNNVAIKIGD
GDFYSLAVASSNTESNKLDSFFNNIKQTVLGVGGSQAINYLVQGDEANTSGTHKGRGAIN
LVEVSAIDGFKMEEIDQVGSDLSNRLSSSVTAVEMPDIDSIESALAGSLNRKNRLVSERN
ENLIVNGDFEQGNQGWQSTHGVEAYNAASSYGLDNTGHGKRVSELDVNVNTTLSQELQNL
SEGEVVSLNFDFAKRSGLSPEEGMAVLWNGESIFSTSGGEAAWQNKTLQLTAQEGTNRIE
FKGTGRDDGLGYILDNVVAKSIGTLPTNSVTEHARQDQAAKNALSDKEKAEKDRRLLEEE
KDKQLAAIEKSKSQLAATDQEALNQNGQAQSGAIKEEAQAVTEELNVIADRFKELKDETD
DSRELDSHYLDYAGGISEDVQKQLDDIKPTLEKRLADIHWDTIGTQQKVKDAVVLSEAGV
EKGKQNRDKAILDGVDAQLKADQRKEEALSQQQQAEKAKDNAKIAYQDAESRGKRDTVAA
ESKAAQAQADAKGAKLSDSRPDRIRASGSGLSGEKAYESTGAGETGSHIDPESMPEARNR
YYQGLTEEELQALASAKQAVNRLQINAGRRAKNTGVSLTPQSVETQSDRIVVPPSHQTRE
LIRKAPIISGINLEGLGGSKKRAIDSSVLSRAQKIAHIYRWLDNGNVDTRDEYIPVPGFK
RVSADISDKTRQRMVTFVEKYIRNANTNTKNKVSEKVPEDEAASLAKLFVDATLDYDWDK
RVEFIAKLDRYGYSFEPVRDDKSIVSFWSGKSFRRHRDVLEAAQPDGKKIVYDVDVQGNA
FAIQLNKQLMRWGIMYLADPENNEHKALRSAINAAAYSNTGFWSSIYAAGSRGDVYLISE
GGLRLGNYFWNVELPVLRKLQREGLVGEIRLLDKPASEYAGRPIESIGRNLTKPGITVQT
RFDALTIEEQKKRLAVNPGGYKADTVVELDIKLSAIDTMLNQALPFYGLRTERNLLVQKS
DEGFEVRAWPGNGNEFKRIIVKNTTSNNLLKAVERFILANYDNYAQLPDELYFIEDRIIS
HHQGHTRILTEKVNGIWKPVPKLMSVSEFQAVASVAGKTRGDSYQKVIDALESYQNARQG
RKDDELDVIGKLSDLRQQVEGYLLGHPDSGRVPAMKDLLSQIDTRFEESMVLAESTVRIP
EQGDFSSLYDKLGSANLKDSKHFYVDENGDFVTRGKANTHINQKAENFDKAVEQVKAAVI
KEYGQDVSDAVFSNLKASDLSNDGKGIDVSGLRKIHQAIEQHLSPISATLFVWKPSDHSQ
LGHVAMQIGQGRAHINADDAGAINEKNYVSWWPSLNHRTLEADVAFEEHDKFGLEDGDRK
LQRFIEKLQFAQGVDITFKDVTEGFAMMALENPALLQSAGISEQIYQPFVEMWNDRQYEM
ADVGRLFAEELRYQADKNVQDPQLAEKRVANVIREFKDRELKNIRDFKISEADQGRVFRI
NLEGLDVAAMQAEWNKISSDPNEHYQLLTNNCSSIIARVLKAGGAEKLVGHKWLPKFGTW
TPTELFNYAQVLQEAQLEVIAKKQSHSPVEELAALSGKNKALETVVMESDGTPLLNKLIT
KDGVRDPLLNSLQATSAAELVHKPVNLWQTVAVTPQTDGRETRFDGQIIFQMEDDPVATK
AAANLAGKHPDSSVVVQLDSDGQYRVIYGDPAKLSGKLRWQLVGHGRSESEQNNTRLSGY
RADELAIKLKQFTQNFSQAGKPDHISLVGCSLIEDDKRDGFARHFIIALKEQDIHTAVSA
RRSEVAVDVTGRKFTRNENNQWVNSLIDNKIVLNWNERGELETHSERVRRSIAESDINLS
RVGIADVDTPAKGAIVDNADIFAAPEERKNKIEVDSNHISNNPLSYSGNIQVDVGKGEFT
ALNWGTSNIGIKVGTGGFKSLAFGDNNVMVHIGNGDSKHSVDIAGYQALEGAQMFIGNRN
VSFNQGRSNDLIVMMDKSLPTPPLVNPFDGAARISGVLQDIAYSGEEQDWLAAQDQQWTI
AGAKKFVRDMSGLDQTSSVDYKTLVELDSQYERSSRGLKSDTEAALNKKFNQWLSRHGNS
ADMGKMSRADKLRQANEKLAFNFAVGGKGADIQVTTGNWNFVFGDNIQSILDINLGSLFG
LMTQQYSTTGLAQTPFTYNPQDLPRQLKNKLLGRLAGVGADTTLADIFGVDYTADGRIVS
RTGEPVDGVAILKEMIEVIGKFSGEQLQAFTDPDKLLDSLKSHLNMGKDGIRSFAEGHGL
KEKTVDESQEGQVSVANTENDQTGILATGNTKPERAFGFNSLNLPNVFATIFSKDKQEEM
KSLVTNLKENLTADLLNMQEKTFDFLRNSGHLQGDGDIHISLGNYNFNWGGDGKDLGAYL
GDNNNFWGGRGDDVYYSIGTSNIFTGGEGNDLGVLMGRENWMFGGDGDDTAVVAGRINHV
FMGEGNDQTFVFGEGGFIDTGKGRDYVVISGNYNRVDTGEDQDYAVTIGNNNRVELGEGN
DFARVFGNDNRIDGNSGNDSIKLMGYHTVINGGEGDDHLIAETISKFSQFDGGDGQDLLV
LGGYQNEFKGGTGVDSFVVSGDVIDNRVNDINAEDMIVFNDIHWQNLWFQRSGYDLVLSV
NRHTQDKTAQGIFESVGSVTLNNYFNGNRAKLVAQMSDKNASGEREFTALSDNAVDSLIQ
AMSSFTPTVGDNGFIENLDSKAKIAITTAWTDTTIGKAKFA
Download sequence
Identical sequences WP_070974672.1.85560

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