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Domain assignment for WP_071177930.1.10313 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_071177930.1.10313
Domain Number 1 Region: 2359-2602
Classification Level Classification E-value
Superfamily PMT central region-like 5.23e-54
Family PMT central region-like 0.0056
Further Details:      
 
Domain Number 2 Region: 2906-3025
Classification Level Classification E-value
Superfamily PMT central region-like 5.75e-28
Family PMT central region-like 0.0017
Further Details:      
 
Domain Number 3 Region: 3084-3231
Classification Level Classification E-value
Superfamily ADP-ribosylation 1.09e-18
Family ADP-ribosylating toxins 0.014
Further Details:      
 
Domain Number 4 Region: 4129-4339
Classification Level Classification E-value
Superfamily beta-Roll 0.0000000000000419
Family Serralysin-like metalloprotease, C-terminal domain 0.003
Further Details:      
 
Domain Number 5 Region: 3955-4001,4047-4173
Classification Level Classification E-value
Superfamily beta-Roll 0.0000000615
Family Serralysin-like metalloprotease, C-terminal domain 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_071177930.1.10313
Sequence length 4410
Comment RTX toxin [Vibrio cholerae]; AA=GCF_001857455.1; RF=na; TAX=666; STAX=666; NAME=Vibrio cholerae; strain=SIO; AL=Contig; RT=Major
Sequence
MGKPFWRSVEYFFTGNYSADDGNNNIVAIGFGGQIHAYGGDDHVTVGSIGATVYTGSGND
TVVGGSAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYG
GAAAYNGITRKGLSGNVTFAGAGGYNALLHETNQGNLSFTGAGAGNKLDRTWSNRYQGSH
GDVTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQA
EDVYTQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTIIRKGSGNDFAKEGMTNAK
ADEIVLTKAVMSGSWIGQDHHVTAVKSASEPNTYLFAFADSTYTKINKVQLRNDPQTGEL
KYYSTAWYKEGNHLRNLANQDISDNGGFTAVNINGAYTLSDLKVEHQQSVTVHAVEKSLT
EYEWVTYANGAVIDAKEVSLSDAKMGGHAIYADGTKVDVKAVKSNRQPNTYIYAKVLGPY
TKIVVVELANDPETGALKYQARSWYKEGDHTANIANQDISSATGYNPMGKGGYSLSDLHY
SVNAVRSTSETVADIEEYTDQTLFKPANDSGESSGDVRFNGAGGGNVIKSNVTRGNVHFN
GGGIANVILHSSQFGNTEFNGGGAANVIVKSGEEGELTFRGAGLANVLVHQSQQGKMDVY
AEGAVNVLVRLGDGQYLAHLLAYGNISVQKGSGDSRVVMLGGYNTHTQIGSGNGLWLAAG
GFNVMTQVGKGDVAAVLAGGANVLTKMGEGELTSGMLGGANVITHISNDDQLSNTTAVAL
GGANILTKKGKGNALAVMGGGANVLTHVGDGTTTGVMVGGANILTKIGNGDTTGIMLGVG
NVLTHVGDGQTLGVMGAAGNIFTKVGDGTSIAVMIGAGNIFTHVGEGNAWALMGGLGNVF
TKVGNGDALALMVAEANVFTHIGDGMSVALMLAKGNVATKVGNGATFAAMVGNANIFTHV
GSGSTFAAMIGQANIMTKVGNDLTAALMVGKANIMTHVGDGTSLGLFAGEVNVMTKVGNG
TTLAAMFGKANIMTHVGDGLTGVLALGEANIVTKVGDDFMGVVAAAKANVVTHVGDATTA
AVLAGKGNILTKVGEGTTVGLLISDVGNVMTHVGDGTTIGIAKGKANLITKVGDGLGVNV
AWGQANVFTQVGDGDRYNFAKGEANLITKVGDGQELSVVQGQANIITHVGNGDDYTGAWG
KANVITKVGHGQNVVLAKGEANIVTQVGDGDSFNALWSKGNIVTKVGDGMQVTAAKGQAN
ITTTVGNGLSVTAAYGDTNINTKVGDGVSVNVAWGKYNINTKVGDGLNVAVMKGKANANI
HVGDGLNINASYAQNNVAIKVGNGDFYSLAVASSNTSSNKLSALFDNIKQTVLGVGGSQA
INYLVQGDEASSSGTHKGRGAIATPEITKLDGFHMDAIKEVGSDLGDSLTGSVTKVDTPD
LNKMQHALNVDDSSAQAPNLIVNGDFEQGEHGWQSTHGVEASYAGSVYGVEGEGHGARVT
ELDTYTNTSLYQDLANLAQGEVIAVSFDFAKRAGLSNNEGIDVLWNGEVVFSSSGDESAW
QQKTLKLTAQAGSNRIEFKGTGHNDGLGYILDNVVATSESSQQANAIREHATQNPAAQNA
LSDKERAEADRQRLEQEKQKQLDAVAGSQNQLEATDQQALGNNGQAQRDAVQEESEAITA
ELTKLAQGLDVLDGQATHTGESGDQWRNEFASGLLAGVQTQLDDAKQLANDKIAEAKQTH
ADNQNKVKDAVAKSEAGVAKGEQNRAGAEQDIADAQADAEKRKADALAKGKDAQQAESDA
HHSVNNAQSRGDRDVQMAESKANQAQADAQGAKQNEGDRPDRQGVTGSGLSGNAHSVEGA
GETDSHVNTDSQTNADGRFSQGLTEQEQEALEGATNAVNRLQINAGIRAKNSVSTITSMF
TEANTDSIVVPTTTSQDVVRKEIRISGVNLEGLGEASHDSAVSLVAARAEKVANLYRWLD
SDHPRATEQYIPVPGFERVDVNVSDETKQRLTQFVSGYIEHTDNQVPKDQAQALATLFVE
ATLNYDWDKRVEFLTKLESYGYSFEAPHGENSLVSFWSGRNFKEYRNVLDNAQPDGKKVV
YDIDVQGNAFALKLNKQLMRWGDMFLDLDNAAQNHLQSSIEAAAYSNTGFWSSVYATGAK
DDVYVIAEGGMRLGNYFWNVELPLLRQLQREGLVGEIRLLDKPVSEYKDVPVNEIGHKLT
DAGVGVKVRFDALSAAQQAELLAINPKGYKADSLVELDVKLSAIDSMLRDALPFYSLRTE
RNLLVQEGDEGFKVRAWPGNDDKSKTIVLDNPEDATQQKTIERFILANFQNFEQMPDELF
LVDNKVISHDKGITHVLAQKVDGVWLYNAKVDLMSVTELLDAANVTGKIRGESYQQVIDA
LSEYHSSVTEFSDYEQESIEKLLSLRKKIEGYVLGHPDSGRVEAMNSLLNQVNTRLEEVS
VLAVSEPNIKAQDSFSRLYDQLETANLKGTKHLYLDQNGEFVTKGKGHLVNIDLLGNSEA
VIEKVKLAVSNEYGQTIADTIFAGLTAHDLAKDGKGIDIAGLKKVHLAIEQHLSPVSATL
FLWKPSDHSALGHAALQIGQGRNQINTDQALAYNQSNYVSWWPMGSKSSSLNHLFDVSSE
AMPDLKLRWKDFSQPAAQGESLAFDMQSEENDDFGLKSAEDKLKDFIKQVASASGVDEKF
KDISEAFTMMALMNPDILESANIPEHISKPFVDQWNDTSYDMQDVAQRFAKELQEQAKVA
VNSEQMEQQISEVVRRFAQDELDKIQTFKETQADQGRVFRINLEGLDVAAMQAEWHRLSN
DPDARYQLLNKNCSSIVAKVLKAGGADKLIGHTWRPKFGVWTPTELFNFAQDLQDAQLVS
YTKKDKQHIDTDSLQSTDRVLESLGESKQTTLDLSSVFTKNELKDEAKVFAKPIGDSYQK
ILDQLDFLHATQGDKQLEAALRLNNLVDDYVSSHEKSGRNTALLSLKNRVTESLYSNVAQ
ESRVEIAKLSADRIDLAVDLLHRLRSSTNEVSSVVDIKSLADGTKYNSQESLAVLSKQEV
PFNKDLQDQQLVQGRVTGEAVLNKVQLSDDEIKGIKWYTSEGFQYVNEALRKEEKLAYFV
KDNAVNAVKGLSKLETFEGTVYRAFMPGVSLNDLASHVTPGQLFSDQGFTSTSTSTELAK
SFRGGKGTVILTILDAKGTNVAGLAQLNQAEVLLKPGAHLRIEAVKETDQNLHIVAKYTE
EFRAGEIVRNLFDGKTIGIAINQNTSTINESVVTSFDHDEITAMLKPKPLLEENKLGVGQ
QVQNRNVQNWYTADVTVIDGGDTRFDGQVIVQMENDPVVAKAAASLAGKHAENSVIVQLD
ADGNYRVVYGEPSKLDGKLRWQLVGHGRDHSEHNNTYLSGHSADELAVKLAKFQQTFNQA
ENISSKPDHISIVGCSLVSNDKQKGFGHQFINAMDANGLRVDVSVRSSELAVDEAGRKHT
KDANGDWVQKAENNKVSLSWDAQGEVVTKDQRIRNGIAEGDIDLSRIGVSDVDEPARGAI
GDNSDVFDAPEKRKPETEVIANSSSSNQLSYSGNIQVNVGEGEFTAVNWGTSNVGIKVGT
GGFKSLAFGDNNVMVHLGNGDSRHSANIAGYQAFEGAQMFVGNRNVSFNMGRSNDLLVMM
EKSIPTPPLVNPFDGAARISGVLQNIATSGQGEGWLAAQEQQWTLSGAKKFVKDLSGLDQ
SSSVDYTTLVKLDSQNERDSRGLKHDAEATLNKQYNQWLSGNGNSGTSQLSRADKLRQAN
EKLAFNFAVGGQGADIQVTTGNWNFMFGDNIQSILDTNLGSLFGLMTQQFTATGQAKTTF
TYTPQDLPRQLKNKLLGKLAGVGAETTLADIFGVDYTASGQIVSRNGEAVDGVAILKEML
EVIGEFSGDQLQAFIDPAKLLDNLKAGIDMGADGIKSFAETHGLKEKAPEEEKDNSSVSV
NGASANSTQGAADGNAEITETQDRAFGFNSLNLPNLFATIFSQDKQQEMKSLVENLKQNL
TADLLNMKEKTFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRG
DDVFYATGTSNIFTGGEGNDMGVLMGRENMMFGGEGNDTAVVAGRINHVFLGAGDDQSFV
FGEGSEIDTGTGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYNR
INAGTGNDVVKLMGYHAVLNGGDGDDHLIAAAISKFSHFDGGDGRDLMVLGGYQNTFKGG
TDVDSFVVSGDVIDNLVEDIRSEDNIVFNGIDWQKLWFERSGYDLKLSILRDPSNDSDQA
KFEHIGSVTFSDYFNGNRAQVVIAMSEKDLSGEREYTMLSDSAIDALVQAMSGFEPQAGD
NGFIDSLESKSQAAIGMAWSDVVHKKGLMV
Download sequence
Identical sequences WP_071177930.1.10313

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