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Domain assignment for XP_001103447.1.72884 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001103447.1.72884
Domain Number 1 Region: 10-91
Classification Level Classification E-value
Superfamily PDZ domain-like 4.73e-20
Family PDZ domain 0.0000762
Further Details:      
 
Domain Number 2 Region: 505-569
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.83e-17
Family LIM domain 0.023
Further Details:      
 
Domain Number 3 Region: 446-508
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.17e-16
Family LIM domain 0.0019
Further Details:      
 
Domain Number 4 Region: 413-444
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000419
Family LIM domain 0.0012
Further Details:      
 
Weak hits

Sequence:  XP_001103447.1.72884
Domain Number - Region: 564-592
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00159
Family LIM domain 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001103447.1.72884
Sequence length 596
Comment PREDICTED: PDZ and LIM domain protein 5 isoform X9 [Macaca mulatta]; AA=GCF_000772875.2; RF=representative genome; TAX=9544; STAX=9544; NAME=Macaca mulatta; AL=Chromosome; RT=Major
Sequence
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAQG
MTHLEAQNKIKGCTGSLNMTLQRASATPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPPFAASGLH
ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
KHIVERNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
DNTKKANNSQEPSPQLTSSVASTRSMPESLDSPASGRPGVASLTTAAAFKPVGSTGVIKS
PSWQRPNQAVPSTGRISNSATSSGSVAPASSALGQPQPSAQDTLVQRAEHIPAGKRTPMC
AQCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYVGFVEEKGALYCELCYEKFFAPECG
RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
Download sequence
Identical sequences A0A1D5R093
XP_001103447.1.72884 ENSMMUP00000029285 9544.ENSMMUP00000029288 ENSMMUP00000029288

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