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Domain assignment for XP_001116679.1.72884 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001116679.1.72884
Domain Number 1 Region: 662-812
Classification Level Classification E-value
Superfamily C-type lectin-like 8.92e-44
Family C-type lectin domain 0.00000556
Further Details:      
 
Domain Number 2 Region: 151-265
Classification Level Classification E-value
Superfamily C-type lectin-like 1.53e-42
Family Link domain 0.0051
Further Details:      
 
Domain Number 3 Region: 267-360
Classification Level Classification E-value
Superfamily C-type lectin-like 1.48e-30
Family Link domain 0.0067
Further Details:      
 
Domain Number 4 Region: 44-155
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000215
Family V set domains (antibody variable domain-like) 0.048
Further Details:      
 
Domain Number 5 Region: 812-871
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000403
Family Complement control module/SCR domain 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_001116679.1.72884
Sequence length 910
Comment PREDICTED: brevican core protein isoform X4 [Macaca mulatta]; AA=GCF_000772875.2; RF=representative genome; TAX=9544; STAX=9544; NAME=Macaca mulatta; AL=Chromosome; RT=Major
Sequence
MAQLLLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRISGHAPLQGVLGGALTIPCHVH
YLRPPPSRRAVLGSPRVKWTFLSGGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDV
SLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFVGAQEACA
RIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV
DPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDR
CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPS
AIPEASNPASDPASDGLEAIVTVTETLEELQLPQEAMESESRGAIYSIPIMEDGGGGSST
PEDPAEAPRTVPEFETQSMVPPTVFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALW
AWPSEFNSPGPEVSLPTEPAAQESLSQAPARAVLQPGVSPLPDGESETPRPPRVHGPPTE
TLPSPRERNLASPSPSTLAGAREAGEETGGPELSGVPRGESEETGSSEGAPSLLPATRAP
EGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAMVPASGDCVPSPCHNGGTC
LEEEEGIRCLCLPGYGGDLCDVGLSFCNPGWDAFQGSCYKHFSTRRSWEEAETQCRMYGA
HLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSG
ENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVLR
YRCREGLAQRNLPLIRCQENGRWETPQISCVPRRPARALHPEKDPEGRQGRLLGRWKALL
IPSSSPTPGP
Download sequence
Identical sequences XP_001116679.1.72884 ENSMMUP00000022489 ENSMMUP00000022489 9544.ENSMMUP00000022489

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