SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_001305868.1.43485 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_001305868.1.43485
Domain Number 1 Region: 160-381
Classification Level Classification E-value
Superfamily Ankyrin repeat 3.38e-55
Family Ankyrin repeat 0.0001
Further Details:      
 
Domain Number 2 Region: 7-120
Classification Level Classification E-value
Superfamily Pseudo ankyrin repeat-like 0.0000000824
Family Pseudo ankyrin repeat 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001305868.1.43485
Sequence length 382
Comment ankyrin repeat protein [Trichomonas vaginalis G3]; AA=GCF_000002825.2; RF=representative genome; TAX=412133; STAX=5722; NAME=Trichomonas vaginalis G3; strain=G3; ATCC PRA-98; AL=Scaffold; RT=Major
Sequence
MRAVKPDTIFESIMNDDIVAFTSFTEREDFDKNDVLVSPFIIKGIRYSLLEVCCYYGATK
CFSFLREKFDSEITKRCLLFSILSGNHSLVKECLKVVEPDDECMRYAILSHNIAFVTFLM
IEYKLTINLFYCGCYHNLQAFFVYLDQTNDIKECFLYSPFFNIPSLCQYFLDHGASINDR
DNALNKTALHVAACVNAVETAKFLIANGAIVNIKDNNGMTPLQFAARHNSKEMIELLIAN
GAIISDRNNENKSALYLSTENDAGDAAEALILHGANVNDSYNYGETVLHVAADLNKWNIV
SVLVSHGAIINAKEYKNESTALHKAAMKGNTYIVKILLSHGADVNSKDSYRKTALDYAKE
NGNEKIEKLLISHGAIPNSMDN
Download sequence
Identical sequences A2FQ66
gi|121887411|gb|EAX92938.1| gi|123420957|ref|XP_001305868.1| 97190.m00039 5722.A2FQ66 XP_001305868.1.43485

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]