SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_001368599.1.35504 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_001368599.1.35504
Domain Number 1 Region: 218-361
Classification Level Classification E-value
Superfamily PH domain-like 4.61e-37
Family Third domain of FERM 0.0025
Further Details:      
 
Domain Number 2 Region: 115-220
Classification Level Classification E-value
Superfamily Second domain of FERM 7.07e-31
Family Second domain of FERM 0.000075
Further Details:      
 
Domain Number 3 Region: 32-113
Classification Level Classification E-value
Superfamily Ubiquitin-like 3.1e-26
Family First domain of FERM 0.00058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_001368599.1.35504
Sequence length 597
Comment PREDICTED: FERM domain-containing protein 3 isoform X1 [Monodelphis domestica]; AA=GCF_000002295.2; RF=representative genome; TAX=13616; STAX=13616; NAME=Monodelphis domestica; AL=Chromosome; RT=Major
Sequence
MFAPCHCVQGGRRTMKMIRFRSSSIKSLSQEMKCTIRLLDDSEISCQIQRETKGQFLIDH
ICNYYSLLEKDYFGIRYVDPEKQRHWLEPNKSIAKQMKSHPPYTMCFRVKFYPHEPLKIK
EELTRYLLYLQIKRDIFHGRLLCSFTDAAYLGACIVQAELGDYDPDEHPENYISDFEIFP
KQSHKLERKIMEIHRNELRGQSPPVAEFNLLLKAHTLETYGVDPHPCKDSTGTTTFLGFT
ASGFVVFQGNKRIHLLKWSDVCKLKYEGKTFYALGSQKEKKAMLAFHTSTPAACKHLWKC
GVENQAFYKYAKSSQIKTVSSSKIFFKGSRFRYSGRVAKEVVEASSKIQRDPPEVHRANI
TQSKSSHSLNKQLIINMEPLQPLLPSPSEQEEEVHLDGGIPLLREDDRTAPVISSSPIKN
LREYGDFSREHEEKIKEEPLAISELVYNPSTSLLPTPVDEDEIDMLFDCPSRLELEREDT
DSFEDLEADENAFLMAEEEELKEARRALTWSYDILTGNIQVNPFVKSFSRLLVVGLGLLL
FVFPLLLVLLESGIDLSFLCEIRQTPEFEQFHYEYYCPLKEWVARKINFILYLLGCS
Download sequence
Identical sequences F6PGZ8
ENSMODP00000010729 13616.ENSMODP00000010729 XP_001368599.1.35504 ENSMODP00000010729

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]