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Domain assignment for XP_001494737.1.31192 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001494737.1.31192
Domain Number 1 Region: 47-157
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.22e-31
Family Spermadhesin, CUB domain 0.00054
Further Details:      
 
Domain Number 2 Region: 258-369
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.27e-26
Family Spermadhesin, CUB domain 0.0015
Further Details:      
 
Domain Number 3 Region: 449-487
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000017
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 4 Region: 164-200
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000209
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 5 Region: 410-448
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000128
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 6 Region: 211-253
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000223
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 7 Region: 373-410
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000733
Family LDL receptor-like module 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_001494737.1.31192
Sequence length 858
Comment PREDICTED: low-density lipoprotein receptor-related protein 12 isoform X1 [Equus caballus]; AA=GCF_000002305.2; RF=representative genome; TAX=9796; STAX=9796; NAME=Equus caballus; breed=thoroughbred; AL=Chromosome; RT=Major
Sequence
MARRWSTKESPRWRSALVLLFFAGVYGNGALAEHSENVHISGVSTACGETPEQIRAPSGI
ITSPGWPSEYPAKTNCSWFIRANPGEIITISFQDFDIQGSRRCSLDWLTIETYKNIESYR
ACGSTIPPPYISSQDHIWIRFHSDDSISRKGFRLSYFSGKSEEPNCACDQFRCGNGKCIP
EAWKCNNMDECGDSSDEEICAREAPPTSASFQPCAYNQFQCLSRFTKVYTCLPESLKCDG
NIDCLDLGDEIDCDVPTCGQWLKYFYGTFNSPNYPDFYPPGSNCTWLIDTGDHRKVILRF
TDFKLDGTGYGDYVKIYDGLEENPHKLLRVLTAFDSHAPLTVVSSSGQIRVHFCADKVNA
ARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEINCTMCQKEEFPCS
RNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGSD
EENCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELL
RREAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRSQLGFTSIRLPMAGRSSN
IWNRIFNFARSRHSGSLALVSADGDEVGPSQSTNREPERSHTHRSLFSVESDDTDTENER
RDTAGASGGVAAPLPQKVPPITAVEATVGASGSSSTQSTRGGHTDNGRDVTSVEPPSVSP
ARHQLTSALSRMTQGLRWVRFTLGRSSSVNQNQSPLRQLDNGVNGREEDDDVEMLIPVSD
GASDFDVNDCSRPLLDLASDQGQGFRQPYSATNPGVRPSSRDGPCERCGIVHTAQIPDTC
LEATLKNETSDDEALLLC
Download sequence
Identical sequences F6YIW6
XP_001494737.1.31192 9796.ENSECAP00000014166 ENSECAP00000014166 ENSECAP00000014166

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