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Domain assignment for XP_001568076.1.15230 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001568076.1.15230
Domain Number 1 Region: 421-472
Classification Level Classification E-value
Superfamily Zinc beta-ribbon 0.0000000000000136
Family Transcriptional factor domain 0.0021
Further Details:      
 
Domain Number 2 Region: 162-242
Classification Level Classification E-value
Superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.00000000000458
Family Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.0028
Further Details:      
 
Domain Number 3 Region: 3-46
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.0000000903
Family PWWP domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001568076.1.15230
Sequence length 474
Comment transcription elongation factor-like protein [Leishmania braziliensis MHOM/BR/75/M2904]; AA=GCF_000002845.2; RF=representative genome; TAX=420245; STAX=5660; NAME=Leishmania braziliensis MHOM/BR/75/M2904; strain=MHOM/BR/75/M2904; AL=Chromosome; RT=Major
Sequence
METYAPGDRVWVYIEGDGWWPARVLSDEEMGTRTPGLDLAVQFYAGVEQPATLYELNSHA
DAANICFFETSSEKAVTGNPELEASIRHASADAEANPLKSASAMVVGTRVAAGGSGAAGN
LGAVAVNRAAAKRVRDTGDGSMGTYDGGAATSRPVSGYHHLRSEELHELSRKISSAVAAQ
DVATVRAVLCRLDSVDVYLTELEDTKIGVAVGSVLSQLELKPLWPLARAMVSFWARHLPP
ETLAAIRSVQQRQLSFPPIGASAAASATQHSSPLGKQQRVSFALPGESAFTSSVSPSVTT
TAAGAGAAVSVDSGVVASPQGKTFYDNVYQLLDSPLSTMRYDDAVIEKVARKLAAEITDR
DERQLLLLRLREEELSFIRDNLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKIKAI
EAADNARLNITALFKCGRCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTWIQE
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Identical sequences A4HLZ2
gi|154344264|ref|XP_001568076.1| psu|LbrM33_V2.3090 XP_001568076.1.15230

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