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Domain assignment for XP_001704579.1.56740 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001704579.1.56740
Domain Number 1 Region: 1064-1091
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000335
Family Integrin beta EGF-like domains 0.063
Further Details:      
 
Weak hits

Sequence:  XP_001704579.1.56740
Domain Number - Region: 577-603
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000262
Family Integrin beta EGF-like domains 0.033
Further Details:      
 
Domain Number - Region: 253-279
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000363
Family EGF-type module 0.069
Further Details:      
 
Domain Number - Region: 818-844
Classification Level Classification E-value
Superfamily EGF/Laminin 0.026
Family Integrin beta EGF-like domains 0.072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001704579.1.56740
Sequence length 1093
Comment Neurogenic locus notch-like protein [Giardia lamblia ATCC 50803]; AA=GCF_000002435.1; RF=representative genome; TAX=184922; STAX=5741; NAME=Giardia lamblia ATCC 50803; strain=WB C6; AL=Scaffold; RT=Major
Sequence
MKFFKTACCLVGFLASVSTDAHPDEVASTGKTHYFKKSLSKPLLRTSFDIKESNRCKWNE
VYVHEKCVPRECVYEGVECNSRGVCQQGHGDSYRCHCDDDMHYLPDWGCVPTPCIGDTPI
PCQGGICSEVLAGLYACECLPGMVFAGYCAIPTCIQHPEQGVCSRVGVCADTCQCPPLHA
GDYCEMCTNDAQMVGGKCISHACIDTSGLVCSGRGICAGVNPNFYCACNENYIAINSSTC
VHRNCIDASYEPLVCHGHGECIDNRCSCDDQWWGSFCERPAEPCMPTEVFVDGSCFPRSC
VVENSICNTHGDCIGGVCHCYTYASAHSTLLCYPTTCLFDRNGYMVPCPHGQCTYESQML
GYQCRCYNGYVKIDKECQPSYCVSDIYQSKASLCGGVGFCDLDHGCLCPQSITGRYCTLT
TFATTLSRQFPRLNIFALCEDGFLLINGSCVSKACLTGEKEVCYGDRGYCVHTQRYGWGC
RCYSHYTGPTCSVCSSKGVMINGQCIPALCTVLLSSGDYVECGGHGVCNISTQPNDSSDP
MEVIVCVCDDLSYPIEKTCISKTCITTSPFLKSDFRIICSGHGVCEIDSCLCFGEYTGPE
CSYRNDLICVDGYQPIDGKCVPSECVYIDTICGGHGECISFESGSNSCKCYEGFSLTSIY
GCQPTVCVNSEGLLCKDGTCVQISPNAYECQCQEEYAASHGECHPRECVDWNGNLCNTDR
GRCIYDTRFSSFRCECLDGYSGVFCAQCSNYAVRINGVCVPPQCYIDDGNNVHICGGFGT
CIYQYKKASYCVCDDGAAVQANGQCASWACVQPGLVTNMACSGFGICANERCICNSIFYG
TYCEKVQPNCGPAQIFIKSKEECIPLVCVSNETICNDHGECIRGETTNGVVRAFCQCSPG
YALYNNTLCVPPGCIIHGELCPDGHCTNDLIAPCICDDNYTWTGVECTPNICLNGKDMYG
KYIICSARGSCDSKQGCNCLSIYEGKLCEECGRQGLVINGTCFPSHCVQVSNGTYTICNN
YGSCERSFLGNSEDTYRCACRLPSVDIKDGGCYSPLCIPDPISRLVCNGHGFCDGGHCIC
QKGYKGRRCEHKS
Download sequence
Identical sequences A8BVL6
gi|157432646|gb|EDO76905.1| gi|159108619|ref|XP_001704579.1| NYSGRC-SEC-GL50803_92495 XP_001704579.1.56740

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