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Domain assignment for XP_001888398.1.58555 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001888398.1.58555
Domain Number 1 Region: 397-472
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.000000173
Family UBX domain 0.05
Further Details:      
 
Domain Number 2 Region: 199-288
Classification Level Classification E-value
Superfamily Thioredoxin-like 0.00000403
Family Thioltransferase 0.056
Further Details:      
 
Weak hits

Sequence:  XP_001888398.1.58555
Domain Number - Region: 6-46
Classification Level Classification E-value
Superfamily UBA-like 0.0638
Family UBA domain 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001888398.1.58555
Sequence length 582
Comment predicted protein [Laccaria bicolor S238N-H82]; AA=GCF_000143565.1; RF=representative genome; TAX=486041; STAX=29883; NAME=Laccaria bicolor S238N-H82; strain=S238N-H82; AL=Scaffold; RT=Major
Sequence
MDYLSTGQQQALAQLREIINGADDDVAIGVLSSVDWDVPRAAELIFGSTSTSAVSDRIID
TFEIDDTHQSIPERQPSTSVLATLTRPVFSFLAFPFHVLSNVFRFIFAILRIPFPSLRFT
SLNFYRPLRPRPTFRRGPDSWLRELEEETGAVSIGRLKLPRGTTSSIGLDAGPSSLTSRA
AAGNSGSGNGFTEDGRKVLPDFVLRGYEETLRMCQRDAKIACIVLVSEEHDDVAEFKRST
LTDAAFVKSLYDNGIVVWGGDVRDQDAWSAAEKLQATTYPFVAFIALQPGRTPSSSSSPR
TSAPPTLTVLSRHQGRSVPSSAPTSAQTLLNHLEQQVIPRVTPFLERLRATQRDRERDRQ
LRQDQDRAFRDSAQRDKERIEAAIRAESAQQQARIQAEEEERERRRQAEVEKQKEVVRMG
WRRWTRRVFASEQRKSGSLRVAIRLPSGGRFVHQFEGSATLTTLYALVDAQLIPGEFESR
DDPLSPPDLDGVEGGRLALLETQVESYQSPTEYWGFLVVSAYPRVEIPWRKGVLLGTIEQ
LRGGGQVVVELTQNGLAGSRRSSSEHVPSSSVDDGYSTEDSE
Download sequence
Identical sequences B0DWL8
XP_001888398.1.58555 29883.JGI312756 jgi|Lacbi1|312756|eu2.Lbscf0054g00810

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