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Domain assignment for XP_001921829.2.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001921829.2.45394
Domain Number 1 Region: 62-331
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 3.16e-40
Family TehB-like 0.072
Further Details:      
 
Domain Number 2 Region: 1847-1904
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 2.71e-22
Family Tudor domain 0.00013
Further Details:      
 
Domain Number 3 Region: 1905-1960
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.00000000000001
Family Tudor domain 0.0001
Further Details:      
 
Domain Number 4 Region: 1678-1716
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000155
Family PHD domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_001921829.2.45394
Sequence length 2012
Comment lysine-specific demethylase 4A isoform X1 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MASDSVSQSSQSPATRIMTFHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKPRR
TYDDIEDLVIPTPIQQVVTGQSGLFTQYNIQKKPMTVREFRKTANTDKFSNPRYADFEEL
ERKFWKNLTFNPPLYGADVSGTLYDPDVMEWNIGRLNTILDMVERESGITIKGVNTPYLY
FGMWKSTFAWHTEDMDLYSINYLHFGEPKSWYVVPPEHGKRLERLAKGFFPGSAQSCEAF
LRHKMTLISPSILRKYGIPFEKVTQEAGQFIVTFPYGYHAGFNHGFNCAESTNFATQRWI
DYGKLATLCSCRKDMVKISMDVFVHKFQPERYKLWKAGKDNVPIDHSKPTPEVAEIQKEN
EKGEISDSERAETLEERGEAEAGDQQKANTDDGEEDKAEAFSEKVVKRESDAGKEKAEAE
VEKSVRDEEPSSTSEQISSSSPKQNTGQKRLRSSTDNEAKDDNQVKIEVEEVEKKKAKLG
QNETDNNEEQSVSAEPDDEKAEETMETDTPPPQQQECMEAELSTSDPTSSSDITTQQREE
ESSDVTSSTQSINSVDEDVALGGDVASQSEDVTQSFVVQINPEDITPTDLTDAQPSNITS
HPCSSDIPATSFMSVSSSNFSKHSISFAYTCDGTTEPSDSINLTPRVPSINVAHISDVQP
EPSDIIVSLKQNSSANSTYTSDVQSDLSNVTVDPEHKPSINSTHIINVQSETSNITISSE
HEPSISSTPMSDVQSETSFKYEPGNNSAYVCDVKPEHSDISMSPIYKPGVNFAHTSDVQP
EPSECESCTNSDHICDVQSEANDIIINSKDEMSINSAHTFDVQPEPSDNTVSLTHKPDIS
STSGSDVPSGPGDITDSLGYDPDFNSTHTGHVQSESNNSPKHKLPINSAHTYDVQSGPSD
ITDGHRFESEFNSTHICDVQSGPSDMSVNSKRKSSIDSAQIDDAQSDPSDISIGSKQEYS
INSAQIDNVQSEPSDISIGSKQESSINSAQIDNVQSEPSNISISSKQETSINSTQIDDVQ
SEPSDISISSKNKLRINSAQIDDVQSAPSGISVSSEQETSIISAQVDDVQSEYSDISISS
KHEPSINSTQTDDIQSEPIDISFGSKQESCINSAQMYDVQSEPSDISISSTQETSINSAQ
MYDVQLEPSDISISFKDKPSINSSQVDDVQSEPSDICFGSEQETCINSAQIYDVQSEPSN
ISFSSKQETSINSTQMYDVQSEPSDISISSNQETSINSTQMYDVQSEPSDISISSNQETS
INSTQMYDVQSEPSDISISSNQETSINSTQMHDVQSEPSDISISSNQETTINSTQMYDVQ
SDPSDISISSKHKPSINSARMYDVQSEPSDISISSKHNPSIDSTQMFDVQSEPSDFSISS
KHKPSIDSTQIYDVQSAPSGLTISYKQKTSINSAQMYEVQSEPSDFSVSSKRKPSIDSIH
MYDDVQLKSSNFMVSRTPEPTYKIIPEPSSSVSVNVSGLSSVLASVSQGSVQHIFQRTLS
PAEVLHVHSYAKGDYSDIEPRIQHERDSDSDSESQDDNKKEAERPAEAQYRLPRLPRHHP
LIKDSISDEELQDQAASEEDGLDGEAWARPLTQLWQNRPYNPDREREYNREMGLRPPYCS
ICMLFQAHHRSEGAESEPAVVLRGGQMRTKPLIPERCFTITTEESADVQPSTAHLEEDGT
SLLISCSLCSVRVHTSCYGVASGRVSKDWKCARCKANAFAESCCLCSLRGGALHRANNGK
WVHVLCAVAVQEARFVNITERSPVDLSGIPLQRFKLKCYYCKRRMKKTLGCCVQCSHGRC
PTSYHPTCAQAAGVIMHPDDWPFVVYVTCCRHKGPVQSERNKSAMRELSVGQRVICKHKN
GRYYQCEVIQLTKETFYEVNFDDGSFSDNLFPEDIVNRDCAQLGPPPQGEVVQVRWTDGL
VYGAKFVAAHVIQMYQVEFEDGSLLTAKRDDVYTLDEELPKRVKSRLSKASDMRFDGMFG
EKKVQESKRQRVINSRYRGDYIEPVIYRAIME
Download sequence
Identical sequences I3ITH4
ENSDARP00000126239 XP_001921829.2.45394 ENSDARP00000126239

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