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Domain assignment for XP_002193421.1.42559 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002193421.1.42559
Domain Number 1 Region: 129-373
Classification Level Classification E-value
Superfamily vWA-like 1.78e-83
Family Integrin A (or I) domain 0.000000075
Further Details:      
 
Domain Number 2 Region: 371-458
Classification Level Classification E-value
Superfamily Integrin domains 1.2e-24
Family Integrin domains 0.00038
Further Details:      
 
Domain Number 3 Region: 622-703
Classification Level Classification E-value
Superfamily Integrin beta tail domain 0.0000000000000111
Family Integrin beta tail domain 0.0015
Further Details:      
 
Domain Number 4 Region: 20-78
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000282
Family Plexin repeat 0.0011
Further Details:      
 
Domain Number 5 Region: 579-620
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000363
Family Integrin beta EGF-like domains 0.0024
Further Details:      
 
Domain Number 6 Region: 538-576
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000502
Family Integrin beta EGF-like domains 0.011
Further Details:      
 
Domain Number 7 Region: 80-154
Classification Level Classification E-value
Superfamily Integrin domains 0.0000068
Family Integrin domains 0.0023
Further Details:      
 
Weak hits

Sequence:  XP_002193421.1.42559
Domain Number - Region: 507-538
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0251
Family Integrin beta EGF-like domains 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002193421.1.42559
Sequence length 789
Comment PREDICTED: integrin beta-6 [Taeniopygia guttata]; AA=GCF_000151805.1; RF=representative genome; TAX=59729; STAX=59729; NAME=Taeniopygia guttata; AL=Chromosome; RT=Major
Sequence
MGIELLCLCFLFLLRNNYVQGTCSQESTVTCEDCLLSGPHCAWCLQENYTDSSGIHGRCD
TLENLLSKGCQLNFIEFPISEVEIHRNDPLTASSQKNGYDVTQISPQKLTLRLRPGHAET
IQIKVRQTEDYPIDLYYLMDLSASMDDDLNTIKELGSTLSKEMSKLTSNFRLGFGSFVEK
PVSPFIKTTAAEINNPCRSVPYECLPTFGYKNVLPLTNDAEKFNEIVKGQRISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGNCHLDHNNE
YSMSTVQEYPTIGQLIDKLVQNNVLLIFAVTNEQVHLYENYAKLIPGATVGRLQKDSGNI
LQLIIAAYQELRSEVELEILGETEGLNLSFTAICNNGTFFPHQRKCSHVKVGDTVSFNVT
VSLSSCDKTRRLIKIKPVGLSDMLEMEIHPLCSCNCQAKAEKKSPKCSQGKGSLECGVCV
CSPGYVGPRCECHESSLGASSCRGPAEHSSCSGRGDCYCGQCLCHPSPYGKVYGPRCECN
DFSCVRHRGLQCAGNGDCDCGECRCYSGWTGEYCNCTTDTSTCIAEDGTLCSGRGECICG
TCACTHPGALGQTCEKCPLCGDPCSSRWSCVECHLASDDKSLGDCSEKCKLVDATVSVAK
DYSEDKSISCSLQGENECITTFLLSVDEQGRTVIHSIERKDCAQHPNIPMIVVGVTLAIL
LIGIVLLCIWKLLVSLQDRKEVAKFEAEKSKVKWQTETNPLYRGSTTTFKNVTYKNQDMH
KRPMAADFY
Download sequence
Identical sequences H0Z879
ENSTGUP00000006782 XP_002193421.1.42559 59729.ENSTGUP00000006782 ENSTGUP00000006782

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