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Domain assignment for XP_002195575.1.42559 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002195575.1.42559
Domain Number 1 Region: 152-260
Classification Level Classification E-value
Superfamily Cadherin-like 1.03e-26
Family Cadherin 0.00024
Further Details:      
 
Domain Number 2 Region: 378-481
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-26
Family Cadherin 0.0011
Further Details:      
 
Domain Number 3 Region: 261-376
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-21
Family Cadherin 0.00094
Further Details:      
 
Domain Number 4 Region: 481-589
Classification Level Classification E-value
Superfamily Cadherin-like 1.86e-20
Family Cadherin 0.0023
Further Details:      
 
Domain Number 5 Region: 82-159
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000000528
Family Cadherin 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002195575.1.42559
Sequence length 790
Comment PREDICTED: cadherin-18 isoform X2 [Taeniopygia guttata]; AA=GCF_000151805.1; RF=representative genome; TAX=59729; STAX=59729; NAME=Taeniopygia guttata; AL=Chromosome; RT=Major
Sequence
MRITSTSCICPVLVCLCFVQRCYGAAHHGSIKVTRNQTKHIEGETEVHHRPKRGWVWNQF
FVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQ
KTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTVPEMSEMGTSVLQ
VTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKD
MAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSN
ADMKYTIINGNGSGVFSITTDKETREGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSH
LGPFKDVTMLKVIVGDVDEPPLFTMPFYVMEVYENAKIGTPVGTVTAHDPDAANSLVRYF
IDHNTEEDRYFTIDASTGTIKTAKIFDREETPWYNITVAASEIDNPGLVSHVPVGVRILD
VNDNPPELARDYDVVICENTKPGQVIQTITATDKDDSANGARFHFSLDEGLSLNPNFTLR
NNEDNTASILTKRRRYSRTSQDIYYLPVLISDGGMPPLSSSSTLTIRVCACERDGRVRTC
HAEALLSSAGLSTGALIAILLCIVILLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDD
EGGGEEDTEAFDITALRNPSAAEELKYRRDVHPEVKPLSRHHPSSSLDSIDVQEFLNQRL
AEADLDPSVPPYDSLQTYAYEGHRSEGGSISSLDSATTHSDQDYNYLGDWGPEFKKLAEL
YGEVEPERTT
Download sequence
Identical sequences H0ZA74
ENSTGUP00000007477 ENSTGUP00000007477 XP_002195575.1.42559 59729.ENSTGUP00000007477

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