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Domain assignment for XP_002447282.1.57931 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002447282.1.57931
Domain Number 1 Region: 165-243
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000000000321
Family Eukaryotic type KH-domain (KH-domain type I) 0.0016
Further Details:      
 
Domain Number 2 Region: 271-302
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000000445
Family CCCH zinc finger 0.0018
Further Details:      
 
Domain Number 3 Region: 103-135
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000000235
Family CCCH zinc finger 0.0027
Further Details:      
 
Domain Number 4 Region: 38-62
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000288
Family CCCH zinc finger 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_002447282.1.57931
Sequence length 306
Comment zinc finger CCCH domain-containing protein 31 [Sorghum bicolor]; AA=GCF_000003195.3; RF=representative genome; TAX=4558; STAX=4558; NAME=Sorghum bicolor; cultivar=BTx623; AL=Chromosome; RT=Major
Sequence
MEGAGAARKRSRPESANGYAAGGKRSKDTESFQTGQSSKSKPCTKFFSTIGCPFGEGCHF
LHFVPGGYPAVAKMLNLGSPAVSAPSRTHVDHAALTGASHQASMGKTRMCTKYNTTEGCK
FGDKCHFAHSERELGKPAYMSHEGPPMGGRYGGRPEPLQQASMGPPAGNFGASATAKISV
DASLAGGIIGKGGVNTKQISRVTGVKLSIRDHESNPSQKNIELEGNFDQIKQASDMVRDL
IATISASMPAKNLSASAAPAGGRGGGLGGRSNYKTKLCENFVKGACTFGDRCHFAHGETE
QRRGAA
Download sequence
Identical sequences C5Y9Z9
4558.Sb06g032000.1 XP_002447282.1.57931 jgi|Sorbi1|5058076|Sb06g032000

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