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Domain assignment for XP_002458695.1.57931 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002458695.1.57931
Domain Number 1 Region: 106-172,199-225
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 0.000000000000042
Family alpha-D-mannose-specific plant lectins 0.0041
Further Details:      
 
Weak hits

Sequence:  XP_002458695.1.57931
Domain Number - Region: 198-281
Classification Level Classification E-value
Superfamily YVTN repeat-like/Quinoprotein amine dehydrogenase 0.00863
Family YVTN repeat 0.049
Further Details:      
 
Domain Number - Region: 368-396
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0745
Family Hairpin loop containing domain 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002458695.1.57931
Sequence length 524
Comment G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Sorghum bicolor]; AA=GCF_000003195.3; RF=representative genome; TAX=4558; STAX=4558; NAME=Sorghum bicolor; cultivar=BTx623; AL=Chromosome; RT=Major
Sequence
MAMASTRACVLPMLLAVAVLLLVEQIALSSADFPLGGQATVQLPPAPCQPGFAARAVVLD
TQGHRQPAFVAAVSAAEAGAGRCTCSLVVLLGGVKVWASDHLEKFVPAALCRLELTEDGQ
LRLTDGAGKVGWLSGTAGQGVKALHLDRKTGNLILLDAQNCIRWQSLDDPTDTFLRGQQR
RLPVHLIAPTTKAAAASSVFYSLELDGDKVAAYINFGDTRYSYWELPSPANRTMASARLN
GSGLRLLDLQGATVAQITPPVKKPPVSFLALAGDDGNLVMYYYDTQHQKFRASYKALGFC
ELPLSCSIHEVCSSAGKCKDFSDYADRPPARAAGNASSSSSNPCEGDGDKACMVHLRGVT
TVLRTASPALTNVTLRECVVECARNLSCNAALYVKDDAGGVAAAADDHGVCSHYTLTAGA
REVTDGSHLRYSYWVKFPAAAGGGDDDDDDDDSSLGKLSTGTILMICGAIDVVCAVVFVV
LIAMYFRRLRRLAAAVDRVVELQEGAAEGVGEQNDTDGNGSGHN
Download sequence
Identical sequences XP_002458695.1.57931 4558.Sb03g038440.1 jgi|Sorbi1|5036850|Sb03g038440

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