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Domain assignment for XP_002596318.1.56174 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002596318.1.56174
Domain Number 1 Region: 321-378
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000335
Family Laminin-type module 0.033
Further Details:      
 
Domain Number 2 Region: 376-423
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000157
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 3 Region: 251-297
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000624
Family EGF-type module 0.051
Further Details:      
 
Weak hits

Sequence:  XP_002596318.1.56174
Domain Number - Region: 430-459
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000487
Family EGF-type module 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002596318.1.56174
Sequence length 462
Comment hypothetical protein BRAFLDRAFT_225541, partial [Branchiostoma floridae]; AA=GCF_000003815.1; RF=representative genome; TAX=7739; STAX=7739; NAME=Branchiostoma floridae; strain=S238N-H82; AL=Scaffold; RT=Major
Sequence
EYRPCQPNVIDMAKLTVPRVDPANSTCGFPVSQFCTLEIPTSCDICNARMKGQSHPPNFM
TDKERGVPTWWQSVSWLDYPNPMQINVTLSWNKTFELTNDIVVKFQSVRPYQMIIEKSMD
YGKTWMPMQYYARKCMDSFNKMPVTSSTISRRDIAKVICTQVYSGAMPRPDGSVRLEIED
RFNRYLNSLKNTNDISVALENHQQLRDFVTLTDLRIRLLAPATNGAYSRSTTMELLKYYY
AISDIQVRGRCKCNLHGSDCFMVNGTMTCDCKHNTEGPDCSRCKKPYDTRKWKAGTWKPL
PRGTANECRSKYYGFRHCLSDCNGHSERCRLIQVLGYMVCIGCLHNTMGRNCEQCLPGFY
RDVTKKIVDPDVCAPCNCNQVGSRHNKCNATTGECICKSYTKGPKCDSCVKNYYWTDNQG
CVPAICNNDTLSCQNNGTCVSYQRCDCLPGFGGKFCERQLKC
Download sequence
Identical sequences C3Z4X3
7739.JGI225541 XP_002596318.1.56174

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