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Domain assignment for XP_002664857.2.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002664857.2.45394
Domain Number 1 Region: 1385-1466
Classification Level Classification E-value
Superfamily HMG-box 5.89e-23
Family HMG-box 0.00051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002664857.2.45394
Sequence length 2623
Comment protein capicua homolog isoform X2 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MRPPKKQRGRSPLSARGKGTRKRGGKLDGHSQTTPPAPSHQKYTPSKEDSSQDKQIKSSN
MTNSEGLKGQIKERTMETSKSEETAGIVNKAKSPKNINTNNLTDNTDSIKIASNAHENSH
SNSTDICNTNTQNLTSTNSKSSNQHTNSTASNTQNTNNIGNSLNKSSSLSANHTSTTLSS
RKTATFKARVPKKKYMYEHQATSTSPISSKPVTQLTLHINHLGSPQNSISQNTTPVIRND
LFKASTSDLDDSGNSRSRLEIANIASTETSKGDRIMGDMLKSEVPSEVEKVIQMVEADGY
GEQAPNSVRSSSTDTASEHSVDLEVLEPSCMQLNSGNHVRASRRFNPLNNSTLSVVLSPN
HTQVEQEGSATVAETLAKGLKNQRVLARRRPRRSLKEDEKLVKECIFICGVVRGSNKEQL
NVELQINGEGTLLSYPFHTLVSRPHQPIDLILDAPPPGNELVEVGTRVCVPYGGDKEKEW
YREGVVAQVDSHSACPYMVLLQEEQKKERCSKEETKQTSSSVWVARQNLRLLVPPWDGVM
REKEREEREHREEIEVERELCQLSEGMDLVTAGPPRENCRFPSPDTGAHRYESTLSSSTS
PAVVMVANNMFGLASRGENEGTENRERVREREHERKQLQTPEVDMEVLRLNMAPLRDSGG
PLVSGGPKTGAPNQHRQILSKPPGYPSPITVVRGISGTTLGSPQPTPSSVVLGSDGGNSH
HISPSVPPSPSSRGSLTPLDKTPTPSQTSTPVPGSSASSASSSRSRTPLSAVQQKYKKGD
VVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSGGGG
ESSSGTVTPSDLRGRASSEFEWDETSRDSSETSSRGTDSRPRLGLPSLLPQDFSRFDFDE
CEAATMLVSLGSRSVTPSFSPISNQSPFSPTPSPSASPLFGFHPANFSPITASPVLPHRR
HKHPSGTNSGLPKHGTGGTEREKDRHLSGIVPSFHPNLTFTVPMSPGKRRTDAPPPPVPL
LQEYTKPDQEQSCRDPSLVTNLCIISPQTTTVTHPQRLLSTTASSSPASPLSLESGSQCT
ISQQPLRDSPVIVRNPEVPLIKFTELPLARVAEVDRTSFTENSQTGVHPETGLQVPVPIN
AASTNGSVLLQNPTSTLVLVSTTSSIPNPNPAGLPTQPSATLACISVPSPVSGAGLIGAG
DGGGQDKSCPATLQQPVPCHPAPTALLPLILPTETLHPVPCKDIIMGRPGTVWTNVEPRS
VPVFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHPQTAALKKESQSGSVLKEIIEGAPNPS
SRPTPSADELPPEREKDAERERPDSETESDVDDPFFPGVLPDPPISASPGKRRSQSLSAL
PKDDKNSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPK
EKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEPPSV
SMGMELKGMGPGMVSVSERVGGEGHGQLTRPRAFSQSAMHSLERSERGNPQALAELAQMC
GDGSQVGGRGALSQTQRGVSEDMTSDDERMVICEEEGDDDVIEDSYPGSSIDLKCKERVT
DSDSENGSGDEGERKRVFAPVICSSSYGPGHGRSVSLSSYPTSRRFSDTSSKRKRTIEAG
DGEQREGEGGASQPSAGQSILVSSGGGVSSMLGAVRVASTVVTNVVRPVVSTPVPIASKS
PHDRKLAPSQTQLLIGHGATGNTAAASAGGGGYYSSSSPSPINAPAGQAGLVTNLVLGGT
FQAPPAVQLVTPPPPSQNPASPAHSNGPLPLPVLQSHILPSGSLAPSSGQKPITQVQYIL
PTLSANNPKSPSPQQASQPTSIFTLPTALPTHATLANGKQSGYVSSPVGVVSPGARVQTQ
SPVLQGKMLVPMATVRAAPAPSPQFPLVAPPLPVQNGAQAGSKIIQIAPMPVVQSQLPSA
GPVQPGSPFSVTMGTATVVAPGSTPSQTVLLPPPPTRITYVQSTPGVPSPLPLVPSTTGS
SSQTVSAAPGSAYVSSPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPNPPHAPAITAL
YTPTNVTLATGVVSMATVSPSVVYTVSSSSSLSPHILPKHTTATSMTPVTLDRQVNVSVH
SERQLHQERSLERQHTDSQVYTLSSERQTEKGCLLQLDKHFQVPSKGSSSSVAPPSATSV
PLQPGSPAQPSHSGSAPGTPKLITARPPQKVKATLANIPVGSYDGGGRGKEREKERDRDK
EREREKDKDTSSRFSFEVEKVEKIEKSNSPAEEGAPETPTHFGVETSAPSGRCKETNAKE
VEKKDSHPSSPLPPPSGSDPSPSQSHGDKDAPPKKVKARPPPLKRPFDSVDKVLSEVYFE
ERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPISPKRKSRR
RSSCSSEPNTPKSAAKCEGDIFTFDRPDGEDILGELEFDKVPYSSLRRTLDQRRALVMQL
FQDHGFFPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSESAGISDLSLPG
PSGVVTMDPALGADPLEKEVEREGEQHSPEEPRNAGDSQDSSR
Download sequence
Identical sequences F1Q6M9
ENSDARP00000072328 ENSDARP00000072328 XP_002664857.2.45394

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