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Domain assignment for XP_002731697.1.86028 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002731697.1.86028
Domain Number 1 Region: 228-492
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.41e-81
Family Nuclear receptor ligand-binding domain 0.00000000512
Further Details:      
 
Domain Number 2 Region: 176-255
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 5.2e-30
Family Nuclear receptor 0.0000202
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_002731697.1.86028
Sequence length 497
Comment PREDICTED: retinoic acid receptor RXR-alpha-A [Saccoglossus kowalevskii]; AA=GCF_000003605.2; RF=representative genome; TAX=10224; STAX=10224; NAME=Saccoglossus kowalevskii; AL=Scaffold; RT=Major
Sequence
MDNITDLDAVTYHQAQQQHHHQQQQQQHHHHQQQQQQHHHQQHHQHQHQLHQQQQHSPHH
HQQQQQQPSVTSITSQQVPQVGLGSVGSMGSIPNPPVSSVTSPGMVIGSPGSMMTLSPAM
SSMTSPVMAMNSHMHMGMQQEDIKPIITPQGMARPLQSPITPPTPTSPASHTLNKTVCAV
CGDRASGKHYGVYSCEGCKGFFKRTVRKDLHYACRDEKNCIVDKRQRNRCQYCRYQKCIA
MGMRREAVQEERQRKDKAGGDGEVESTSNANSDMPVEKILEAEIHVEPKTDTYVDTPNDP
VTNICQAADKQLFTLVEWAKRIPHFTELPLDDQVILLRAGWNELLIAAFSHRSIAVKDGI
LLATGLHVHRNSAHSAGVGTIFDRVLTELVAKMREMKMDKTELGCLRAIVLFNPDAKNLG
TVQKVEELREKVYASLEEYCRKTYPDEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD
TPIDTFLMEMLEAPSSN
Download sequence
Identical sequences XP_002731697.1.86028 Sakowv30025796m

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