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Domain assignment for XP_002876471.1.15461 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002876471.1.15461
Domain Number 1 Region: 453-576
Classification Level Classification E-value
Superfamily TPR-like 1.33e-26
Family Tetratricopeptide repeat (TPR) 0.0012
Further Details:      
 
Domain Number 2 Region: 214-306,358-437
Classification Level Classification E-value
Superfamily TPR-like 1.35e-24
Family Tetratricopeptide repeat (TPR) 0.0031
Further Details:      
 
Domain Number 3 Region: 555-674
Classification Level Classification E-value
Superfamily Thioredoxin-like 0.0000000000000423
Family Thioltransferase 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_002876471.1.15461
Sequence length 685
Comment hypothetical protein ARALYDRAFT_486314 [Arabidopsis lyrata subsp. lyrata]; AA=GCF_000004255.2; RF=representative genome; TAX=81972; STAX=59689; NAME=Arabidopsis lyrata subsp. lyrata; AL=Scaffold; RT=Minor
Sequence
MSHYRRHSLEPSITTKFRDSLNFQRDDDVIDKPDFRELDFASPISPLRPRGSSSAAATPA
PSGSSSSSSGSASGKQAVTSQFARRSHSGEFSGLSETSPVKPGSRNVNRSLKPGHRRSAS
AGTPLIYSGLGFSPVNNNSSRGGGSGATSPNPGVLPTGNICPSGRIMKTGMATRASVRPE
TLCTGTANYGHGNIIRSGGKVSHATKAAAEMGDSEEAKKAGNEMYRKGNYAEALALYDRA
ISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRFDPSYARAHQRLASLYLRLGEAEN
ARRHLFFSGQCPDQADLRRLQTLEKHLRLCTEARKIGDWRTVISEIDAAIANGADSSPQL
VACKAEAFLRLHQIKDSDLCLSNIPRMDHHHTQSPAKLFGMTCDAYVLCVQAQVDMALGR
FESAVVKAERAMTIDHSNNPEVVSVLNNVKNLAKARTRGNELFSSRRYSEASVAYGDGLK
FDAFNSVLYCNRAACWFKLGMWEKSVDDCNQALRIQPSYTKALLRRAASYGKLGRWEDAV
RDYEVLRKELPGDSEVAESLQRARTALSNKSEELKYLGFNNEVEEVSTIDKFKTATSLPG
ISVFHFKSSSNRQSEAISPFVNTLCLRYPLVHFFKVDVEESLALAKAESIKKVPTFKIFK
KGEKVKEMVCPSHQLLEDSVTHFLL
Download sequence
Identical sequences D7LW58
jgi|Araly1|486314|fgenesh2_kg.5__2306__AT3G58620.1 59689.fgenesh2_kg.5__2306__AT3G58620.1 XP_002876471.1.15461

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