SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_003001138.1.67963 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003001138.1.67963
Domain Number 1 Region: 363-535
Classification Level Classification E-value
Superfamily vWA-like 6.23e-22
Family Integrin A (or I) domain 0.029
Further Details:      
 
Domain Number 2 Region: 164-292
Classification Level Classification E-value
Superfamily PH domain-like 0.00000000000493
Family Pleckstrin-homology domain (PH domain) 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003001138.1.67963
Sequence length 872
Comment von Willebrand and RING finger domain-containing protein [Verticillium alfalfae VaMs.102]; AA=GCF_000150825.1; RF=representative genome; TAX=526221; STAX=1051613; NAME=Verticillium alfalfae VaMs.102; strain=VaMs.102; AL=Scaffold; RT=Major
Sequence
MFSRHKTPKGHSAGASTYDDHTRGTQSTLLELGLVSPKSVRDPQRSKYSAGGVNPYDSDV
PTFPEKGHSIAAGTVRGHRGHRHTASSGSARSTDSNSKTVRSSHDHGDQHRPTRQPPISA
QRRPVLTNAKIEDAFARPPSPARSAPRFYPYESPEVLEEITESLRNRVDNWHGLDFSRFG
KLRLYGTLRVGKDKLSWQELECFLFAEMLICVKEKKVILANQWDENGLPKKSTRCTLKGS
ILIKKHLNEVTETGNIDENVLTLSLSVAELPQFHLRFENRNQLKLWQQALLDLNAVETSP
IRSPEYDRGDLSEVEEEDWQRSRPQRVSSVASSWGGAKSATTAPTEYTNFQRSPGLPALV
HVPIDVVVVVPISSSMQGVKINLVRDALKFMINTLGDRDRMGLVTFGSGGGGVPLVGMTT
KAWPGWNNILSAIKPIGQKSHRADVVEGANVAMDLLMQRKHNNPIATIMLISDASTSDAD
SVDFVVSRAEAAKITIHSFGLGMTHKPDTMIELSSRTKASYTYVKDWMMLRECLAGCLGA
MQTLSHQNVKLKLKLPEGSPAKFHKISGALQITKRATGRDAEAALGDLRFGDKRDILVQL
VILPDNASQEQLPQDPWDNIVSGLEALGGSGESDEQRVASVEEVPLIQADLTWGDILRDG
TLSHMPRPTLLAITMLPAQAKAKNSWSGSPPIPPHPGIVQRRMELLTSDMLTRALTLVSR
GQHDRAHTLLNETRSILKGLGKGGLPPVPSLPPNKSLPSTPHPGHDGSPTTGTPDPQAHT
FPYPIYHLLRHGSLPGAWHWPQPLTRRPQSQHWHRRQHRGCLDAELESSLEWISHPAVFG
RDSRKAVLQAYWRHQLTTRLYFPNADRVHLVW
Download sequence
Identical sequences C9SVK9
VDBG_08934T0 XP_003001138.1.67963

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]