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Domain assignment for XP_003103528.1.11157 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003103528.1.11157
Domain Number 1 Region: 243-335
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000000000336
Family Eukaryotic type KH-domain (KH-domain type I) 0.0013
Further Details:      
 
Domain Number 2 Region: 433-507
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000000541
Family Eukaryotic type KH-domain (KH-domain type I) 0.0024
Further Details:      
 
Domain Number 3 Region: 338-406
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000365
Family Eukaryotic type KH-domain (KH-domain type I) 0.0037
Further Details:      
 
Weak hits

Sequence:  XP_003103528.1.11157
Domain Number - Region: 85-133
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.000552
Family Eukaryotic type KH-domain (KH-domain type I) 0.008
Further Details:      
 
Domain Number - Region: 188-261
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0232
Family Eukaryotic type KH-domain (KH-domain type I) 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003103528.1.11157
Sequence length 586
Comment hypothetical protein CRE_28700 [Caenorhabditis remanei]; AA=GCF_000149515.1; RF=representative genome; TAX=31234; STAX=31234; NAME=Caenorhabditis remanei; strain=PB4641; AL=Scaffold; RT=Major
Sequence
MSERKRTLDVDQEGSASKRPLNSDPIDYSNDYSPRSPSPIRSPSIASYSPCPSPSPPVSP
TPIIRKIERRTFEVPEKFLDSVSKRIHEVQKETGCNVCVSTRITGWTRTVYLEGFQEDIE
LAIDRIDELVTSSVGFIHQVATRYLKFGDGMSPRSPSPPRKSLRSEYSPYKSPRDESDED
IEIIDNPRVSRELLIPLGLYGSFGSPMREQTVSICKRNGVNWNVPDAETSSKTEEKLVMR
LYGVEESVEKAMKEIEEFMENYSEDEMLIHTTKVSRVIGKNGGTIQLISEKSGAVCHFDR
ESLDDSLESSKTLRITGTATQIEKAKEMVQDLIDSTRCFMEIPYRLYDDVVGDKKENITY
ISAVSGAECVAWSGDDERKTTIRIQGTEKQVEHAKSLLQDAIDKEHKKGGPLVVSELYIL
AIWAEMDRPVQFNTMNVPTEKVDQVIGVSGSYINLIREQSNACIEYDPRGPVKKFLISGT
TVQVETAKALIKEVTDGPPQVSIPVWNRFEPRMTSGPALTLTPPPSPHSPLFYQNMPPQF
SFQASPYYPGPSGPSNAPRIPYQYLPQPPSSLFAQYIPRPPFFPPR
Download sequence
Identical sequences E3MK31
31234.CRE28700 CRE28700 XP_003103528.1.11157

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