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Domain assignment for XP_003117366.1.11157 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003117366.1.11157
Domain Number 1 Region: 347-581
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 9.81e-37
Family DBL homology domain (DH-domain) 0.00047
Further Details:      
 
Domain Number 2 Region: 172-296
Classification Level Classification E-value
Superfamily BRCT domain 0.00000000000538
Family DNA topoisomerase II binding protein 1, TopBP1 0.038
Further Details:      
 
Domain Number 3 Region: 112-192
Classification Level Classification E-value
Superfamily BRCT domain 0.000000032
Family DNA ligase 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003117366.1.11157
Sequence length 929
Comment hypothetical protein CRE_02186 [Caenorhabditis remanei]; AA=GCF_000149515.1; RF=representative genome; TAX=31234; STAX=31234; NAME=Caenorhabditis remanei; strain=PB4641; AL=Scaffold; RT=Major
Sequence
MDVSMLQSPQKRSRSIQKLAVWKGDVKEHKEIFDMLNQQKEKRKVEVVPYEHLDELDSDW
SEYTFFCGDFTSDLFHTLTKTQDSGASAHLIVGPAVLKHKLQTTQDFMLLRPCRPLYCEL
MKNVTMKLSTEVLNKRELVEMVHFMGGSVRKDTVQRTNVFIAAKVEGKVQSMTLVGVPTL
RADWITECWKKRDDPYFDVFEQDFIDKHRLGVFEGLSLYFHGFKKNEIDDMMMNLNNTKG
ALADDPSKATHVVYNPINDDIEPLPVSSNQVHVTQEWFWVSLHRGCCAFEDNFALPTGTL
RRKPLDNSNINSPIGKSLRSHNSRSLSSMRDCSGEGPSLNMTPDYIYSNDDVENMCKSPR
QPSKRLRVCMEMVETEKNYVVLLKLVVKFKQALETEISQNEFMTKSDVAMIFGKLDPILE
LHEKIYARLTTVLNEANNLLSVVNGKKNDDKSLDFAQVWIDAKEEMKKAYPQYLNSFDTI
KRLFDKQDKENSKFHTFCKAKESNPEFHRLKLTDLMVKPVQRLPSVVLLLKEIAKKSDSK
LKHTAEEAAKAIDEVLKIANKTREKNDNLISHLSKFTDIENVPPILVAANRMFIRELVVS
PIASTSSRLSQFSKMKLFLFHDVLVITKVRSEKNTMQRLARHASFASLHARQRRPYKYID
QIQLITMRSAFRIRAPEDVSKFLEAQSHVHGTKPRDVFVWCLIHRDEQGGDTETVFESPD
SEEVRDFLDEIHVKIMSNCGRYFFLPDPVEVNELNDAQVVDLTNRYFRNLCGSKPQNGHG
SQMNITVSERTPRNEWSHNDTIMGPPQSQSRMRRAFSNAQLTITSTLGFGRNPSRNNLAR
ISENSSFMASPRVSCDPAALANMTSVGMPGCNSESESTPKRGLRARLTSATFNRTGALGR
NTSMRRQTHGFSHSEKEPSRSRTSSHLDL
Download sequence
Identical sequences E3LFJ2
31234.CRE02186 CRE02186 XP_003117366.1.11157

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