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Domain assignment for XP_003135128.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003135128.1.46622
Domain Number 1 Region: 218-281
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000000000085
Family LIM domain 0.059
Further Details:      
 
Domain Number 2 Region: 278-344
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000107
Family LIM domain 0.019
Further Details:      
 
Weak hits

Sequence:  XP_003135128.1.46622
Domain Number - Region: 182-221
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0357
Family LIM domain 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003135128.1.46622
Sequence length 622
Comment prickle-like protein 3 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MFARGSRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHA
VPVDLERIMCRLISDFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYV
NSPGEKYRIKQLLHQLPPHDSEVQYCTALEEEEKKELRAFSQQRKRENLGRGTVRIFPVT
ITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCSTCRELLVDLIYFYHAGKVYCG
RHHAERLRPRCQACDEIIFSPECTEAEGRHWHMGHFCCFECEASLGGQRYVMRQSRPHCC
ACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLI
FCSRACSLGSEPTAPGPGRRSWSAGTVSTPLAASTASFSAVEGASETTTKGTSTEPASAA
GPEEPARFLRGAPHRHSMPELGLRSAPEPPSGPPGQPDPHPEDGAFGRQSAPRVSFRDPL
VSDGGPRRTLSAPPAQRRRPRSPPPRAPTRRRHRRHHHHHHHHHHHHHHRRHSSRRRHHQ
CDSGSGSDSGSCSSSSTSPSSESSEDDGFFLGERIPLPPHLCRSVPARDTAAETPNSPSP
QLPGTSRPGMSRQARDKNCIVA
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Identical sequences F1RW44
ENSSSCP00000013082 XP_003135128.1.46622 ENSSSCP00000030387

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