SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_003200485.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003200485.1.45394
Domain Number 1 Region: 1301-1396
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 2.88e-21
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0000649
Further Details:      
 
Domain Number 2 Region: 426-632
Classification Level Classification E-value
Superfamily Tropomyosin 0.00000458
Family Tropomyosin 0.0044
Further Details:      
 
Weak hits

Sequence:  XP_003200485.1.45394
Domain Number - Region: 647-819
Classification Level Classification E-value
Superfamily Tropomyosin 0.000271
Family Tropomyosin 0.0015
Further Details:      
 
Domain Number - Region: 949-1150
Classification Level Classification E-value
Superfamily Tropomyosin 0.000353
Family Tropomyosin 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003200485.1.45394
Sequence length 1398
Comment early endosome antigen 1 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MLRRILQMTPGKGGSQSSESEQPSADMNNESSEGFICPQCMKSHNSAEELFKHYEVFHEP
GDQPSPFSPGREDLTLLRQEIQDLQASLKEERWFSEELKKELDKVQGRIATNKGLQSDGT
SGEDAELEMRLNESETEKFNIKQMKDLFEQKAAQLATEIVDIKSRYDEEKSMREALEQRL
ANLNQDMQKEKQEKEKLSAELLQRPGVEDVEVLKKELVQVQTLMDNMTREREEESERLKG
QYEQLQANFTTSEKTIAQLKAELEKGPQEAAVYTQQIHQLQSSLNNLQQQSQALSEKLSR
KEKENQELEERLGHEQASKKSLQANLHQKELELQESRARVSSGEAALSRAQAELTERGEE
AARLRRELGELEKNQQELKAERKQLQQQREDKENQGLQQQSEISQLHAKLLEAERQVGEL
QGRLKEQRQLSGEKLKDREQQAADLQLKLSRLEEELKESSTKSTDLQHQLDKSKQQHQEL
QTLQQSTNGKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKESVSQLETEREDLCAKI
QAGEGEAALLNQLQEKNHSLQEQITQLTDKLKNQSESHKQAQDNLHEQVQEQKTHLRSAQ
DRCQGLETTVTELNTQLTESREKIAQLDTQLKAKTEMLLSAEAAKNAQRADLESHLETAQ
NALQDKQQELSKVQAQLEEQARRLTEKQEQCSQLENGLKDSRDKLMTAEQRIETLQTQTK
KAEVELTELRSGREQAQKEQSSLKKQISELEMKTKELNRLLDSEKQGASTQQEELKKKSS
ALTETRQKLEKAEQERGALQANLDKLSQEGQKQQAELDKKVQGLSSDLQKTQGEKETLVK
EVATVKEALSKASKALKESQTQLDKEKKGSKATLEEKEKVFQKVQQELQKNSEATSKELS
NVKGLLEKSIEAEKSLQSQLTALNAQLKQCQDTLKEKEKSEQQLQAELKTRQGSFSQEVK
KLKTQVSELQASLAKKTEEEAKQKEQITALSKDLSSEKNRCAELQKTSDGTKESLTALQS
DYYGKESELSAVRQDLKVCEEKLVLAQEELVTNRNQLSAYETQIQELKTGHTAMEIDLSK
RDEKIKQQVETLQKLQKQQGQTEEQLKKEKAQCEELRESQSALEKDKNKLSADLKTLAEK
NEKELKDLQAAKQLLIQQKVEMQGKVEAAQASVEKEQREHQKTRDSIKQNEQQLKAETNK
IKQQLASEVKAKEEMVRQREEAEVKMSMQVTALNENVATLKREWQSSQRRVGELEKQTDE
LRGEIAVLEATVQNNQDERRALLERCVQGEGEMEKLQAKMLEMRRKLDDTTAAMQELGRE
NQSLQIKQSQSLTRKWTEDHEVQNCMACGKGFSVTVRKHHCRHCGNIFCAECSARNALTP
SSKKPVRVCDNCFDELQG
Download sequence
Identical sequences F1QS51
ENSDARP00000085782 ENSDARP00000085782 XP_003200485.1.45394

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]