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Domain assignment for XP_003227172.1.98722 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003227172.1.98722
Domain Number 1 Region: 41-469
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.96e-75
Family Integrin alpha N-terminal domain 0.00000118
Further Details:      
 
Domain Number 2 Region: 471-628
Classification Level Classification E-value
Superfamily Integrin domains 9.42e-29
Family Integrin domains 0.001
Further Details:      
 
Domain Number 3 Region: 632-773
Classification Level Classification E-value
Superfamily Integrin domains 7.32e-25
Family Integrin domains 0.0044
Further Details:      
 
Domain Number 4 Region: 780-949
Classification Level Classification E-value
Superfamily Integrin domains 0.0000000000000034
Family Integrin domains 0.009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003227172.1.98722
Sequence length 1040
Comment PREDICTED: integrin alpha-4 [Anolis carolinensis]; AA=GCF_000090745.1; RF=representative genome; TAX=28377; STAX=28377; NAME=Anolis carolinensis; AL=Chromosome; RT=Major
Sequence
MRAPWQQQKQQAAKEAPFLSPPGLARLLLSLSCCSTAAQAYNLDTLSPLVFQGDNGTLFG
YSVLLHSVGRSPWLVVGAPKANWSTNTSVVSPGAIYRCQIGKNPERSCEALQVGDPEGQK
CGKTCLEERDNQWLGVSLSRQPGEDGSIVACGHRWKNVFYISEHKLPNGVCYVIPANFRT
LLSQRICPCYKDYVRRYGEKYGSCQAGIATFYTKDLIIMGAPGSDYWTGSIFVYNKTANI
YISYVDDSQVKSGSYLGYAVGAGHFLSPSSTEVIGGAPQQEQTGKAYIFKIQPRRLSILT
ELKGKKLGSYFGSTVCAVDLNGDGFSDLLVGAPTYSKVREEGRAYVYINSGSGAKMTELE
TALVGSDLYAARFGESIANLGDIDNDGFEDVAIGAPQENDLEGAIYIYNGRKNGISPVFS
QRIRGHQISNSLRMFGQSISGKIDVDSNGYSDVAVGAFLSDSAVLLRTRTVVIVEASLKH
PDSVNRTKLDCVLNGQPAVCVNLNLCFNYSGRTVPGYIVLLYNLSLDGGRRPDTAARFYF
SSNGTSETTSGSIKIYNSNNNTCTILQAFMRKDVRDILAPIHVEATYRLGNHVLKGESTD
ELSPLQPVLQQRKDDDIIHSKFVFARFCSQENCSANLQVSGKLAFPRPHEKKSYLSVGNM
KTLMLNVTLYNSGDDAYQATLHIQLPKGLYFTKILDQEETQINCEVSEKEDHAVRLDCSV
GYLYVDHLSKMDFTFVLDASSLSRAGDDLTISINTTCENEVSSNLLLDNSLTLILPQKHE
VELNAHGSVTPTSFVYGPSEENPPVTCMKEMFNFTFHVSNPGLSLAPAVDLMIQIPNSFV
PSDVKLFNILDVKTTVGQCIYQNHTRDCTLPEKSENMLQEFIMFLTKLDKRLLYCMKNDP
FCLQILCNFGDMESGKEATVQIHLEATPSLLEMGEASTLIFEIKGKVSADQSPKVIELYK
SRQTAYVILEGLHNQKTKKSVTLLFIGMGSIVGILLLLVLAFLLWKVGFFKRKYKHLPQE
QNGRESWSFINSDPNDATDE
Download sequence
Identical sequences H9GEU4
ENSACAP00000008942 XP_003227172.1.98722

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