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Domain assignment for XP_003254483.1.23891 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003254483.1.23891
Domain Number 1 Region: 348-500
Classification Level Classification E-value
Superfamily TRAF domain-like 2.62e-46
Family MATH domain 0.0000000247
Further Details:      
 
Domain Number 2 Region: 64-135
Classification Level Classification E-value
Superfamily RING/U-box 1.11e-18
Family RING finger domain, C3HC4 0.012
Further Details:      
 
Domain Number 3 Region: 186-287
Classification Level Classification E-value
Superfamily TRAF domain-like 0.000000000144
Family SIAH, seven in absentia homolog 0.02
Further Details:      
 
Domain Number 4 Region: 129-172
Classification Level Classification E-value
Superfamily TRAF domain-like 0.000000981
Family SIAH, seven in absentia homolog 0.01
Further Details:      
 
Weak hits

Sequence:  XP_003254483.1.23891
Domain Number - Region: 293-346
Classification Level Classification E-value
Superfamily Tropomyosin 0.0628
Family Tropomyosin 0.0085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003254483.1.23891
Sequence length 522
Comment PREDICTED: TNF receptor-associated factor 6 [Nomascus leucogenys]; AA=GCF_000146795.2; RF=representative genome; TAX=61853; STAX=61853; NAME=Nomascus leucogenys; AL=Chromosome; RT=Major
Sequence
MSLLNCENSCGSSQSEGDCCVAMASSCSAATKDDSVGGTASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCHRPFQKFHINIHILK
DCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPI
PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYISEVRNFQETIH
QLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNF
GMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDS
HLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLE
ALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV
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Identical sequences G1S8G6
ENSNLEP00000021805 ENSNLEP00000021805 XP_003254483.1.23891 XP_003254484.1.23891

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