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Domain assignment for XP_003265183.1.23891 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003265183.1.23891
Domain Number 1 Region: 539-584
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000275
Family TSP-1 type 1 repeat 0.00089
Further Details:      
 
Domain Number 2 Region: 98-130
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000393
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 3 Region: 74-131,193-206,492-530
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000706
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 4 Region: 37-84
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000131
Family TSP-1 type 1 repeat 0.0037
Further Details:      
 
Weak hits

Sequence:  XP_003265183.1.23891
Domain Number - Region: 351-392
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00523
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003265183.1.23891
Sequence length 584
Comment PREDICTED: complement component C8 alpha chain [Nomascus leucogenys]; AA=GCF_000146795.2; RF=representative genome; TAX=61853; STAX=61853; NAME=Nomascus leucogenys; AL=Chromosome; RT=Major
Sequence
MFAVVFFILSLMTCQPGVTAQEKVNQRVRRAATPAAVTCQLSNWSEWTDCFPCQDKKYRY
RSLLQPNKFGGTICSGDIWDQASCSSSTTCVRQAQCGQDFQCKETGRCLKRHLMCNGDQD
CLDGSDEEDCEDVRAIDEDCSQYEPIPGSQKAALGYNILTQEDAQSVYDANYYGGQCETV
YNGEWRELRYDSTCERLYYGDDEKYFRKPYNFLKYHFEALADTGISSEFYDNANDLLSKV
KKDKSDSFGVTIGIGPAGSPLMVGVGVSESEDASFLNELNKYNKEKFIFTRIFTKVQTAH
FKMRRDDIMLDEGMLQSLMELPDQYNYGMYAKFINDYGTHYITSGSMGGTYEYIVVIDKA
KMESLGITSRDIMTCFGGSLGIQYEGTINVGGGLSGDHCERFGGGKTERERKAMAVEDII
SRVRGGSSGWSGGLAQNRSTITYRSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPLEAKR
QNLHRALDQYLMEFNACRCGPCFNNGVPILKGTSCRCQCRLGRLGPACEQTQTEGAKADG
SWSCWSSWSVCRAGIQERRRECDNPAPQNGGASCPGRKVQTKAC
Download sequence
Identical sequences G1RXC0
XP_003265183.1.23891 ENSNLEP00000017897 ENSNLEP00000017897

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