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Domain assignment for XP_003272199.1.23891 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003272199.1.23891
Domain Number 1 Region: 27-110
Classification Level Classification E-value
Superfamily MHC antigen-recognition domain 6.68e-30
Family MHC antigen-recognition domain 0.00000844
Further Details:      
 
Domain Number 2 Region: 113-207
Classification Level Classification E-value
Superfamily Immunoglobulin 7e-24
Family C1 set domains (antibody constant domain-like) 0.0000067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003272199.1.23891
Sequence length 255
Comment PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 [Nomascus leucogenys]; AA=GCF_000146795.2; RF=representative genome; TAX=61853; STAX=61853; NAME=Nomascus leucogenys; AL=Chromosome; RT=Major
Sequence
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNLYQSYGLSGQYTHEFDGDEQFYV
DLGRKETAWRWPELSNFGGFDPQGALRNLAVVKHNLDIMIKRFNSTAATNEVPEVTVFSK
SPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFL
PSADEIYDCKVEHWGLGEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFII
QGLRSVGASRHQGPL
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Identical sequences A0A2I3GGW8
XP_003272199.1.23891 XP_004087147.1.23891 ENSNLEP00000008165 ENSNLEP00000008165

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