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Domain assignment for XP_003354526.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003354526.1.46622
Domain Number 1 Region: 312-373
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000000000754
Family LIM domain 0.00089
Further Details:      
 
Domain Number 2 Region: 370-440
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000000186
Family LIM domain 0.0015
Further Details:      
 
Domain Number 3 Region: 284-310
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000452
Family LIM domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003354526.1.46622
Sequence length 481
Comment thyroid receptor-interacting protein 6 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MSGPTWLPPKQPEPARAPQGRALPRGASGPPPAHGAALQSHPRVNFCPLPSEQCYQAPGG
PEDPGLAWVGCHGAPQRSQGLPPDRGALRPGSLDAEIDSLTSMLAELDGGRGHAPRRPDR
QAYEPHQLPAYRSGPGSLKPNGGSVPPTPLPAASYGGPTPASYATASTPAGPAFPVQVKV
AQPVRGCGPPRRGAPQASGPLPGPHFPLPGRGEVWGAGYRSHREPGPGGKEEAAGVSGPP
GGRGGGYGPQVPLSQPPEEELERLTKKLVQDMNHPPSGEYFGRCGGCGEDVVGDGAGVVA
LDRVFHVGCFVCSTCRAHLRGQHFYAVERRAYCESCYVATLEKCSTCSQPILDRILRAMG
KAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEET
VRIVALDRSFHVGCYKCEECGLLLSSEGECQGCYPLDGHILCKACSAWRIQELSATVTTD
C
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Identical sequences I3LCI1
ENSSSCP00000021756 XP_003354526.1.46622 ENSSSCP00000021756

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