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Domain assignment for XP_003441453.1.78416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003441453.1.78416
Domain Number 1 Region: 27-135
Classification Level Classification E-value
Superfamily SRCR-like 6.67e-38
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00017
Further Details:      
 
Domain Number 2 Region: 295-395
Classification Level Classification E-value
Superfamily SRCR-like 6.02e-35
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00023
Further Details:      
 
Domain Number 3 Region: 404-516
Classification Level Classification E-value
Superfamily SRCR-like 9.02e-26
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0012
Further Details:      
 
Domain Number 4 Region: 174-273
Classification Level Classification E-value
Superfamily SRCR-like 7.46e-21
Family Scavenger receptor cysteine-rich (SRCR) domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003441453.1.78416
Sequence length 740
Comment PREDICTED: lysyl oxidase homolog 2A [Oreochromis niloticus]; AA=GCF_001858045.1; RF=representative genome; TAX=8128; STAX=8128; NAME=Oreochromis niloticus; AL=Chromosome; RT=Major
Sequence
MLRLAVFCFLLYTLLVASSAQSDSNQPVIQLRLAGEKKKHYEGRVEVFYNGEWGTVCDDD
FSIYAAQVVCRELGFTGAESWSPSAKYGKGEGRIWLDNVHCTGSEKSLAHCESNGFGVSD
CKHSEDVGVVCSSKRIPGFKFIRNQANSQEGLTVQVEEVRIRATYSHRKRIPITEGFLEV
KDGGKWRQICNEDWNQKNSRVICGMQGFPGEKRFNTRPYKLLASRRKKNYWGFSINCTGN
EADLSDCKLGREIEQKGNSTCGKGMPVVVSCVPGRVFAPSVSIGFRKAYRVEQPLVRLRG
GAMIGEGRVEVLKNGEWGTVCDDNWNIRAATVVCRELGFGSAKEALTGARMGQGIGPVHM
NEVECSGFEKSLTECYFNPNSLGCSHEEDAAVKCNVPAMGFHNRLRLSGGRNPYEGRVEV
LGERNGSLVWGTVCSDSWGTMEAMVVCRQLGLGFASNAFQETWYWQGDSSADPVVMSGVR
CSGTELTLEQCLHHGKHVACPKGGGRFAAGVSCTMTAPDLVLNAQVVEQTTYLEDRPMYA
LQCAHEERCLSGSADKADPSSYRRLLRFSSQIHNNGQSDFRPRASPQSWVWHDCHRHYHS
MEVFTHYDLMSLNGTKVAEGHKASFCLEDTYCDEGIQKRYECANFGAQGITVGCWDTYRH
DIDCQWIDITDVKPGDYILQVVINPNYEVAESDYTNNIMKCRSRYDGHRIWTYNCHTGGT
LSSETEETFPGLLTNQLSHR
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Identical sequences I3KTL5
ENSONIP00000024461 XP_003441453.1.78416 ENSONIP00000024461

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