SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_003445899.1.78416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003445899.1.78416
Domain Number 1 Region: 129-275
Classification Level Classification E-value
Superfamily Thioredoxin-like 2.46e-33
Family UAS domain 0.034
Further Details:      
 
Domain Number 2 Region: 314-443
Classification Level Classification E-value
Superfamily Ubiquitin-like 2.84e-21
Family UBX domain 0.0062
Further Details:      
 
Weak hits

Sequence:  XP_003445899.1.78416
Domain Number - Region: 10-48
Classification Level Classification E-value
Superfamily UBA-like 0.000204
Family TS-N domain 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003445899.1.78416
Sequence length 445
Comment PREDICTED: FAS-associated factor 2 [Oreochromis niloticus]; AA=GCF_001858045.1; RF=representative genome; TAX=8128; STAX=8128; NAME=Oreochromis niloticus; AL=Chromosome; RT=Major
Sequence
MAAPEEPELSQAQTEKLLQFQDLTGLESMDQCRRTLEQHNWNIEAAVQDRLNEQEGVPSV
FNPPPSRPLQVNTADHRVYSYIVSRPQPRGLLGWSYYLIMLPFRFTYYTLLDIFRLALRF
IRPDPRGRVTDPVGDVVSFIHSFEEKYGQAHPVFYQGTYSQALNDAKRELRYLLVYLHGD
DHQDTDEFCRSTLCTEEVITFLNTRMLFWACSTSKPEGYRVSQALRENTYPFLAMIMLKD
RKMTVVGRLEGLIQPEDLINQLTFIMDANQTYLMSERLEREERNQTQVLRQQQDEAYLVS
LRADQEKERKKREEQEQKRQEEEKVRQSALAEERRRRTLEEEKERKSECLPPEPLADDPE
SVKIVFKLPNDTRVERRFLFGQSLTVIHDFLFSLKETPEKFQIVTNFPRRVLPCLPTEEQ
PNPPTLKEAGLSRSEVLFVQDLTDD
Download sequence
Identical sequences I3KMG7
XP_003445899.1.78416 ENSONIP00000022312 ENSONIP00000022312

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]