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Domain assignment for XP_003470090.1.53824 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003470090.1.53824
Domain Number 1 Region: 164-226
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 5.89e-24
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 2 Region: 394-450
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.9e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 856-912
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.97e-21
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 4 Region: 743-800
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.26e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 5 Region: 450-506
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.41e-20
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 6 Region: 800-856
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.8e-20
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 7 Region: 897-949
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.18e-19
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 8 Region: 706-757
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000133
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 9 Region: 358-407
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000185
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003470090.1.53824
Sequence length 1019
Comment PREDICTED: zinc finger protein 316 [Cavia porcellus]; AA=GCF_000151735.1; RF=representative genome; TAX=10141; STAX=10141; NAME=Cavia porcellus; strain=inbred line 2N; AL=Scaffold; RT=Major
Sequence
MAALHTVPDSPATQLERVTDGSECDPDQEEEEEKGKDMEEVEEEEEEEEIAIEEEAKEVA
DVVEEAEVQEVAEVEVEAEFEEDDDDDDNDDDNHDDDDNVEEVLAEEQSSGLGTQEQLSH
GGDAKFPVRGKAPQTCCIPAAAQDEDLEEEEEEDEDDDEDFLTAGSQGLMTFEDVAVYFS
LEEWERLDADQRGLYQEVMQENYGILVSLGYPVPKPDLIFRLEHGEEPWVPDSPHPEEGD
IVTGVYTGAWYWTDDMEDHEEEDDEDFLAEIAEEENEPPGLWSAAYGVGDVPGTWGPDDS
DSAQTPEGWGSDSGNLEVLTEESEEKPFLPGQEPGINLVTPWAYPTVVAAPTGRPETTCD
VCGKVFPHRSRLAKHQRYHAAVKPFGCEECGKGFVYRSHLAIHQRTHTGEKPFPCPDCGK
RFVYKSHLVTHRRIHTGERPYRCAFCGAGFGRRSYLVTHQRTHTGERPYPCAHCGRSFSQ
SSALARHQAVHTADRPHCCPDCGQAFRLRADFQRHRRGGGCTEPGGSDSVRREPCEAPAA
GPAGPEECETAPEGPQEPEANETDKDPENEMREEVAAAEVPAPENKKDSESSRRFLEMGN
GLGEGEGPSSHPLGLHFPVHPKSWLHPDGFQILGLPDFGERLSADGRALPGPLGSPLVLA
EAAGLGRDPFSGGGAGAGLGLRMFAPTVGGLLAEPAPAAMAEEETPWICSDCGKTFGRRA
ALAKHQRYHAGERPHRCADCGKSFVYGSHLARHRRTHTGERPFPCPECGARFARGSHLAA
HVRGHTGEKPFVCGVCGAGFSRRAHLTAHGRAHTGERPYECAECGRRFGQSAALTRHQWA
HAEEKPHRCPDCGKGFGHSSDFKRHRRTHTGEKPFRCADCGRGFAQRSNLAKHRRGHTGE
RPFPCPQCGKRFSQRSVLVTHQRTHTGERPYACVHCGRRFSQSSHLLTHMKTHRGTAGTP
GQTGATTTPVPKVEAPTSGQPSAGSAPGELGSTLLEFAGGTSFGSEAAFAGPSAAYEES
Download sequence
Identical sequences XP_003470090.1.53824

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