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Domain assignment for XP_003476077.1.53824 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003476077.1.53824
Domain Number 1 Region: 148-391
Classification Level Classification E-value
Superfamily vWA-like 2.67e-80
Family Integrin A (or I) domain 0.000000326
Further Details:      
 
Domain Number 2 Region: 371-480
Classification Level Classification E-value
Superfamily Integrin domains 8.89e-24
Family Integrin domains 0.0032
Further Details:      
 
Domain Number 3 Region: 645-717
Classification Level Classification E-value
Superfamily Integrin beta tail domain 0.00000000000129
Family Integrin beta tail domain 0.0081
Further Details:      
 
Domain Number 4 Region: 44-99
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000356
Family Plexin repeat 0.0026
Further Details:      
 
Domain Number 5 Region: 603-642
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000809
Family Integrin beta EGF-like domains 0.0076
Further Details:      
 
Domain Number 6 Region: 561-599
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000809
Family Integrin beta EGF-like domains 0.0086
Further Details:      
 
Weak hits

Sequence:  XP_003476077.1.53824
Domain Number - Region: 535-563
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0218
Family Integrin beta EGF-like domains 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003476077.1.53824
Sequence length 799
Comment PREDICTED: integrin beta-7 [Cavia porcellus]; AA=GCF_000151735.1; RF=representative genome; TAX=10141; STAX=10141; NAME=Cavia porcellus; strain=inbred line 2N; AL=Scaffold; RT=Major
Sequence
MVVWSVSLVFLLVLGKGESELDDKISPRGKATEWGDPDLSLPESCQPAPSCKECILSHPS
CAWCKQLNFTASGEAESRRCAPRKDLLARGCPAQELEEPRGWQEVLQDEPLSHGYRGEGA
TQLAPQRVRITLRPGEPHQLRVRFLRAAGYPVDLYYLMDLSYSMKDDLERVRQLGHALLV
QLQKVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPSRLEPCQSPFSFRHVLSLTGDAQ
AFEREVGRQNVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFHTAGDGKL
GGIFMPSDGRCHLDSNGLYSSSSEFDYPSVSQVAQALSAANIQPIFAVTSATLPIYQELS
QLIPKSAVGELSEDSSNVVQLIMDAYHSLSSTVILEHSSLPPGVNISYESYCGGTETKVE
AGVRGQCNHVRVNQTVDFWVTLQAKSCLQEPHYLRLRARGFSEELTVELHTLCDCNCSDT
QLQDLHMHCSGGQGQLQCGMCSCLPGRLGRLCECSEADLSSPDLESGCRGPNGTGPLCSG
KGRCQCGRCSCSGQSSGRLCECDDAGCERHEGKLCGGFGHCRCGVCHCEANRTGRACECS
GDMDKCISPVGGLCSGHGHCKCNRCQCLDGYYGAVCDQCPGCKTPCEKHRDCAECGAFGT
GPLAANCSMACAHANVTLALGPILDDGWCKEKTQDNQLFFFLIEDEAGGRVVLTVRPQEK
REDHTQAIVLGCVGGIVAVGLGLVLAYRLLVEIYDRREYSRFEKEQLQLNWKQDSNPLYK
SAITTTINPQFQRAESPVL
Download sequence
Identical sequences A0A286XN57
ENSCPOP00000013352 10141.ENSCPOP00000013352 XP_003476077.1.53824 ENSCPOP00000013352

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