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Domain assignment for XP_003477921.1.53824 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003477921.1.53824
Domain Number 1 Region: 25-144,326-613
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 5.14e-55
Family Integrin alpha N-terminal domain 0.0000431
Further Details:      
 
Domain Number 2 Region: 110-331
Classification Level Classification E-value
Superfamily vWA-like 1.03e-41
Family Integrin A (or I) domain 0.000000211
Further Details:      
 
Domain Number 3 Region: 773-912
Classification Level Classification E-value
Superfamily Integrin domains 1.1e-26
Family Integrin domains 0.002
Further Details:      
 
Domain Number 4 Region: 613-772
Classification Level Classification E-value
Superfamily Integrin domains 2.98e-21
Family Integrin domains 0.0088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_003477921.1.53824
Sequence length 1170
Comment PREDICTED: integrin alpha-L [Cavia porcellus]; AA=GCF_000151735.1; RF=representative genome; TAX=10141; STAX=10141; NAME=Cavia porcellus; strain=inbred line 2N; AL=Scaffold; RT=Major
Sequence
MKNSRIIITSSLLSGTFLFEPASSYNLDVKEAQNFSFPHAGRHFGYRVLQVGNGVVVGAP
GEGNNTGNLYQCELRNGICRPVSLGGFNYTSKYLGMTLATDPIDGSILACDPGLSRTCDQ
NTYLSGLCYLFPQNLGGPVLQGHPGYQECIKGNVDLVFLFDGSMSLQQDEFQKIVDFMKD
VMRKLSNSSYQFAAVQFSSTYKTEFNFLDYVKSKDPDVLLAKVKHMRLLTNTFGAINYVA
KEVFREELGARRDATKVLIIITDGEATDTGNVDMAKNIIRYIIGIGKHFKNTHSQQQLHQ
FASKPTEDFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDLASFNMELSSSGISAALCKG
HAVVGAVGAKDWTGGFVDLNENLQDRAFVGSEQQTPEVRAGYLGYTVTWLPFQGSVSLVA
AGAPRYQHVGQVLLFQELKDTGHWTQIQKIEGTQIGSYFGGELCGIDIDQDGETELLLIG
APLFYGEQRGGRVFIYQRKQLGFKAVSELQGLPGYPLGQFGAAIAALRDINGDGLMDVAV
GAPLEEQGAVYIFNGQPGGLRPQPSQRIEGTQVLSGIQWFGRSIHGVKDLDGDGLTDVVV
GAEGQMIVLRSRPVVDVITRMSFFPLEIPVHEVECSYSASPRKKEGVNLTVCFQLKSLTR
QFQGRLVTNLTYTLQLDGHRSRSRGLFPGGRPELTSTTGVSQDESCKKFWFHFPVCIQDL
ISPINISLNFSLWEKEETMQNKDMENPDMWPVLRPSPHSETKEIPFEKNCGEDKKCEADL
KLSFSPARSRELHLIPSSSLAMEWTLSNSGEDAYWVQLSLSFPRGLSFRKVEMLRPHSQM
PVSCEELPEEPKLLTKNLLCNVSSPIFKAGTLVGIQVMFNTLMNSSWGDFVELNTTVRCE
NENASLLEDNSATTSVPVLYPINVLIEDQENSTVYISFTPKGPKIHQIKHIYQVRIQPSV
HDHNMPMLEAVVKVPQPLSKQPLTHRWSVQMEPHITCHREDLRHPANATEPCLPGAEIHC
PLVFRQEILIQVTATVELVGDIEASYMVSLCSSLSVSFNSSRHFHLYGSNASLAQILTKV
DVVYEKEMLYVYLLSTIGGILLLLIIFLVLYKFGFFKRNLKEKMEADGGALNGTPREDDG
PFTVSGEKATDLDCLEPLHGEEVQDGGLKD
Download sequence
Identical sequences H0V9G6
10141.ENSCPOP00000006456 ENSCPOP00000006456 ENSCPOP00000006456 XP_003477921.1.53824

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