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Domain assignment for XP_003753694.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003753694.1.4139
Domain Number 1 Region: 244-499
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.15e-45
Family Nuclear receptor ligand-binding domain 0.00000695
Further Details:      
 
Domain Number 2 Region: 119-202
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 8.15e-27
Family Nuclear receptor 0.0000412
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003753694.1.4139
Sequence length 504
Comment PREDICTED: bile acid receptor-like [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MANTYVTTSDGYYLAEPTQYYDILPEQLHYQLCDTDFQEPPYSQYSTAQFPPALQSPSLQ
SHFSTYGLEPQYSGGSWCGLDTRESSQSTYVVVHDDEDEFPGTQRCRPTCSLRWKGQDEL
CMVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYSCKNGGHCEMDMYMRRKCPECRLKK
CKAVGMLAECLLTEIQCKSKRLRKSFKHRPTLSSAIQVEDEGTDTKHVSSTSRSGKGAQD
DMTLTAEERRLLNTIVTAHRKSMVPVGEISALLQEYSNPELSFLRLSEASILHANWLMKF
TKGLPGFENLTAEDQTALQKESKTEVMFLHVAQLYGGRDSTSGSTVRPAKPSAGTLEVHN
HRGDECVYSSENFFKEGYPSATLTGITREFIASLSYFYRRMRELNITDTEYALLTATTVL
FSDRPYLKNKQHVENLQEPVLQLLFKYSKMYHPEDPQHFAHLIGRLTELRTLSHSHSEIL
STWKTKDPRLVMLFSEKWDLHSLY
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Identical sequences D3ZFA7
XP_003749414.1.100692 XP_003753694.1.4139 ENSRNOP00000031123

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