SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_003793320.1.62490 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003793320.1.62490
Domain Number 1 Region: 106-292
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.87e-73
Family F-box associated region, FBA 0.000000021
Further Details:      
 
Domain Number 2 Region: 42-134
Classification Level Classification E-value
Superfamily F-box domain 0.0000000000000144
Family F-box domain 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003793320.1.62490
Sequence length 292
Comment PREDICTED: F-box only protein 2 [Otolemur garnettii]; AA=GCF_000181295.1; RF=representative genome; TAX=30611; STAX=30611; NAME=Otolemur garnettii; AL=Scaffold; RT=Major
Sequence
MDGDGDPESVGQPEEASPEDQPEEASAEEERPEDQEEDEEAYLAELPEPLLLRVLAELPA
AELVQACRLVCQRWRELVDGAPLWLLKCQQEGLVPEGGTEDERDHWQQFYFLSKRRRNLL
HNPCGEEDLEGWIDVEHGGDGWRVEELPGDCGVEFTHDDSVKKYFASSFEWCRKAQVIDL
QAEGYWEELLDTTQPAIVVKDWYSGRCDAGCLYELTVKLLSEHEDVLAEFNSGQVAVPPD
SDGEGWVEISHTFTDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSGVWVEP
Download sequence
Identical sequences H0X652
XP_003793320.1.62490 ENSOGAP00000010808 ENSOGAP00000010808

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]